Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr...    36   0.018
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    36   0.018
Z70311-5|CAA94378.2|  527|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    28   4.7  
U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p...    27   8.1  
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    27   8.1  

>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
           protein ZK688.5b protein.
          Length = 1595

 Score = 35.9 bits (79), Expect = 0.018
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
 Frame = -2

Query: 427 PRLVLA-PFSRPPQVVFDNVIIGTTCERNLEVINPTKQPQHITLGKALPPGLIVHIPGEW 251
           PR++ A P   PP  +F +         N+E+  P  Q QH  +     PG I   P   
Sbjct: 111 PRIINAIPGLPPPGFIFQSPAFARMIPGNVEIPTPPSQTQHTVVHPIRVPGSIAGTPVLT 170

Query: 250 LEVEPESCNILTMV------WTPNQPTAVRETLNFTNE 155
             V  E C +   V       +PN+P A  +T+ F +E
Sbjct: 171 SRVS-EDCVLQKAVPYRGTSNSPNRPQAASQTVTFPSE 207


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
           protein ZK688.5a protein.
          Length = 1620

 Score = 35.9 bits (79), Expect = 0.018
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
 Frame = -2

Query: 427 PRLVLA-PFSRPPQVVFDNVIIGTTCERNLEVINPTKQPQHITLGKALPPGLIVHIPGEW 251
           PR++ A P   PP  +F +         N+E+  P  Q QH  +     PG I   P   
Sbjct: 111 PRIINAIPGLPPPGFIFQSPAFARMIPGNVEIPTPPSQTQHTVVHPIRVPGSIAGTPVLT 170

Query: 250 LEVEPESCNILTMV------WTPNQPTAVRETLNFTNE 155
             V  E C +   V       +PN+P A  +T+ F +E
Sbjct: 171 SRVS-EDCVLQKAVPYRGTSNSPNRPQAASQTVTFPSE 207


>Z70311-5|CAA94378.2|  527|Caenorhabditis elegans Hypothetical
           protein T25B9.7 protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 57  LPGDILNPFDWFVLPLTFTTDLRRTMTSCLLW--FSFVKLRVSLTAV 191
           LPG  L PF ++ + +     L  T +  ++W   SF+K ++S+ +V
Sbjct: 471 LPGAELTPFWYYSVDVILIVVLSLTSSLIIIWKTLSFIKCQISIRSV 517


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 288 RALPRVICCGCFVGLMTSKFLSQVVPMITLSNTTCGGLENGANTKRGHSS 437
           R +P++  CG FVG  T   L+ + P +     TC  ++NG   +R ++S
Sbjct: 83  RTVPQIFICGKFVGGYTE--LNALRPNLAKILETC-SVDNGETLRREYAS 129


>Z83105-10|CAB05484.1|  499|Caenorhabditis elegans Hypothetical
           protein F14H3.10 protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 21/77 (27%), Positives = 34/77 (44%)
 Frame = -2

Query: 283 PGLIVHIPGEWLEVEPESCNILTMVWTPNQPTAVRETLNFTNENHRRHDVIVLLKSVVNV 104
           PG+I +I  E L++       LT+   PN P      LN T    +RH   +L  +   +
Sbjct: 328 PGIIQNIQKELLDITENGARDLTLKDRPNTP-----YLNATIAEIQRH-ASILNVNFWRI 381

Query: 103 KGKTNQSKGFKISPGKM 53
             +T     +++ PG M
Sbjct: 382 NHETIHFNDYQVDPGTM 398


>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 225 IY*QWYGPPTSLLLLEK 175
           IY  W G PT LLLLEK
Sbjct: 362 IYNTWMGDPTKLLLLEK 378


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 483 LKGLDVLPVNQKNHPKKNVPVWC*LRSPDLHKLCSTM 373
           L G    P   +N+P+ N P+ C     +L ++C T+
Sbjct: 181 LNGFSCSPFGLENNPRSNDPMQCMSSPVELDEICPTL 217


>U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical
           protein F54E7.1a protein.
          Length = 364

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 6   FFL*IATGDFFDDFLFILPGDILNPFDWFVLPLTFTTDLRRTMTSCLLW 152
           F L I  G +  + +F LPG  + PF W +  + F        T C++W
Sbjct: 50  FILYIGYG-YMQELIFKLPG--MKPFGWTLTLIQFLIYSGCGYTECIIW 95


>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
           protein T11G6.5 protein.
          Length = 1406

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 241 EPESCNILTMVWTPNQPTAVRETL 170
           + E  +IL MV+TP+QPT ++ +L
Sbjct: 781 QEEENDILRMVFTPSQPTLLQSSL 804


>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
           protein T11G6.5 protein.
          Length = 1406

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 241 EPESCNILTMVWTPNQPTAVRETL 170
           + E  +IL MV+TP+QPT ++ +L
Sbjct: 781 QEEENDILRMVFTPSQPTLLQSSL 804


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
           protein Y39B6A.30 protein.
          Length = 1408

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = -2

Query: 256 EWLEVEPESCNILTMVWTPNQPTAVRETLNFTNENHRRHDVIVLLKSVVNVKGKT 92
           +WL        IL +       +A  ++LNFT+ N +   V  +++ V N++  T
Sbjct: 422 DWLTAFDNFTRILDLDQLEKDVSAFVKSLNFTDINDQTQSVAEVIEIVKNIRNST 476


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,688,550
Number of Sequences: 27780
Number of extensions: 309781
Number of successful extensions: 1025
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)