Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E06f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13373-1|AAA28375.1|  427|Drosophila melanogaster protein ( D.me...    31   1.3  
AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA ...    31   1.3  
AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain ...    31   1.3  
X05136-1|CAA28782.1|  590|Drosophila melanogaster protein ( Dros...    30   1.7  
BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p pro...    29   5.1  
AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-P...    29   5.1  

>M13373-1|AAA28375.1|  427|Drosophila melanogaster protein (
           D.melanogaster (ANT-C locus) deformed (Dfd) mRNA with a
           homeo box. ).
          Length = 427

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = -3

Query: 456 YIPNLEPSTSKLSGMRDQHFSSYHNNLTLSNIRASINNTTRLRIRNKNKTLQWPRLQTRK 277
           YIP    +TS   G + QH S+ +NN + +N   + NN + L   N N  +      T  
Sbjct: 345 YIPAAPETTSSYPGSQ-QHLSNNNNNGSGNNNNNNNNNNSNLNNNNNNNQMG----HTNL 399

Query: 276 HLHFLEKSLIMLT 238
           H H  ++   ++T
Sbjct: 400 HGHLQQQQSDLMT 412


>AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA
           protein.
          Length = 586

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = -3

Query: 456 YIPNLEPSTSKLSGMRDQHFSSYHNNLTLSNIRASINNTTRLRIRNKNKTLQWPRLQTRK 277
           YIP    +TS   G + QH S+ +NN + +N   + NN + L   N N  +      T  
Sbjct: 504 YIPAAPETTSSYPGSQ-QHLSNNNNNGSGNNNNNNNNNNSNLNNNNNNNQMG----HTNL 558

Query: 276 HLHFLEKSLIMLT 238
           H H  ++   ++T
Sbjct: 559 HGHLQQQQSDLMT 571


>AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain
           protein protein.
          Length = 586

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = -3

Query: 456 YIPNLEPSTSKLSGMRDQHFSSYHNNLTLSNIRASINNTTRLRIRNKNKTLQWPRLQTRK 277
           YIP    +TS   G + QH S+ +NN + +N   + NN + L   N N  +      T  
Sbjct: 504 YIPAAPETTSSYPGSQ-QHLSNNNNNGSGNNNNNNNNNNSNLNNNNNNNQMG----HTNL 558

Query: 276 HLHFLEKSLIMLT 238
           H H  ++   ++T
Sbjct: 559 HGHLQQQQSDLMT 571


>X05136-1|CAA28782.1|  590|Drosophila melanogaster protein (
           Drosophila mRNA forDeformed (Dfd) protein. ).
          Length = 590

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 23/82 (28%), Positives = 35/82 (42%)
 Frame = -3

Query: 456 YIPNLEPSTSKLSGMRDQHFSSYHNNLTLSNIRASINNTTRLRIRNKNKTLQWPRLQTRK 277
           YIP    +TS   G + QH S+ +NN +  N   + NN     + N N   Q        
Sbjct: 507 YIPAAPETTSSYPGSQ-QHLSNNNNNGS-GNNNNNNNNNNNSNLNNNNNNNQMGHTNLHG 564

Query: 276 HLHFLEKSLIMLTTSVYYKP*Y 211
           HL   ++S +M    ++ K  Y
Sbjct: 565 HLQ-QQQSDLMTNLQLHIKQDY 585


>BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p
           protein.
          Length = 1767

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 396 SSYHNNLTLSNIRA-SINNTTRLRIRNKNK 310
           S  H+NL   N R  ++N T  +R RNKN+
Sbjct: 2   SMQHHNLAAKNYRMETVNRTLNIRARNKNE 31


>AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-PA
           protein.
          Length = 1767

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 396 SSYHNNLTLSNIRA-SINNTTRLRIRNKNK 310
           S  H+NL   N R  ++N T  +R RNKN+
Sbjct: 2   SMQHHNLAAKNYRMETVNRTLNMRARNKNE 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,725,512
Number of Sequences: 53049
Number of extensions: 347137
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)