Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312E04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41011-7|AAA82290.1| 271|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AL021488-6|CAA16366.2| 272|Caenorhabditis elegans Hypothetical ... 33 0.16
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 31 0.50
Z81058-8|CAB02923.1| 442|Caenorhabditis elegans Hypothetical pr... 31 0.66
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 30 1.2
Z70310-3|CAA94365.1| 506|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF016653-2|AAC48225.2| 914|Caenorhabditis elegans Patched relat... 27 6.2
Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion transpo... 27 8.1
>U41011-7|AAA82290.1| 271|Caenorhabditis elegans Hypothetical
protein D2024.2 protein.
Length = 271
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 238 VPHKLEIEYGSTPGQKLDIFGTDLPNESPILVFIHGGYWPDVSREISRYPAKSLYPAGVK 417
+P K + YG QK+DI+G D ++ +L+FIHGGYW +R+ PA+
Sbjct: 43 IPRKENVAYGMEENQKVDIWG-DASDK--LLIFIHGGYWAAGTRKDCLTPARCALNNEYA 99
Query: 418 TIIVGYDL-CPAVTLAEVVNQIQNAARYIFE 507
VGY L TL E V + N +I +
Sbjct: 100 FASVGYGLSTEGRTLTETVEDVVNGVDFILK 130
>AL021488-6|CAA16366.2| 272|Caenorhabditis elegans Hypothetical
protein Y45F10A.3 protein.
Length = 272
Score = 32.7 bits (71), Expect = 0.16
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +1
Query: 109 MEFVDLEREYTPVLWSNRLYTPEHRLNLHINLVTAESEIATNNVPHKLEIEYGSTPGQ-K 285
M +DL EY+ S T ++ + + ++ +++ + +I Y +
Sbjct: 1 MSEIDLTSEYSCSKHSKNPETAGEEFDVKVEKIY--EDLKNSSIERQEDIPYFPNGEMTR 58
Query: 286 LDIFGTDLPNESPILVFIHGGYWPDVSREISRYPAKSLYPAGVKTIIVGYD 438
+DI+G + + + + IHGGYW +R+ G + VGYD
Sbjct: 59 IDIWGPETAEK--VFIMIHGGYWLIGNRKKCLAVVHVAQKLGYTVVSVGYD 107
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 310 PNESPILVFIHGGYWPDVSREISRYPAKSLYPAGVKTIIVGYDLCPAVTLAEVVNQI 480
PN P V I G WP + + + AKS+ +I Y C L + +Q+
Sbjct: 53 PNGHPKQVVIDGEIWPPIFKPKNVRTAKSMQFGETDVVIATYPKCGTTWLQHITSQL 109
>Z81058-8|CAB02923.1| 442|Caenorhabditis elegans Hypothetical
protein F11E6.8 protein.
Length = 442
Score = 30.7 bits (66), Expect = 0.66
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 298 GTDLPNESPILVFIHG-GYWPDVSREISRYPAKSLYPAGVKTI 423
G LP+E+ +L I G GY+ +V R R PA L P VKT+
Sbjct: 128 GLLLPSEAVVLETIVGKGYFGNVYRGRMRDPAGRLIPVAVKTL 170
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 286 LDIFGTDLPNES----PILVFIHGGYWPDVSREISRYPAKSLYPAGVKTIIVGYDL 441
L+IF D+ + P++VF HGG + S + +PA L G+ + V Y L
Sbjct: 175 LNIFSPDISKNAQTTYPVIVFFHGGNFQTGS--ANEWPAHGLASRGMVVVTVNYRL 228
>Z70310-3|CAA94365.1| 506|Caenorhabditis elegans Hypothetical
protein R11A8.3 protein.
Length = 506
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = -1
Query: 272 VDPY--SISNLCGTLFVAISLSAVTRLMCKLRRCSGVYN----RFDHSTGVYSLSKSTNS 111
+DPY SI++ FV +S + R + ++ RF H T + S+NS
Sbjct: 279 LDPYWQSIADSAENGFVLVSFGGIARTVDMTESMQRIFYDSFARFSHITFIVKYETSSNS 338
Query: 110 MVTVP 96
++VP
Sbjct: 339 TISVP 343
>AF016653-2|AAC48225.2| 914|Caenorhabditis elegans Patched related
family protein 3 protein.
Length = 914
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 271 LIRTQSPICVERYLWLFRSLLL 206
LI T SP+ ++ LW F S+ L
Sbjct: 729 LIETMSPVAIQSALWTFASMFL 750
>Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical
protein K12G11.1 protein.
Length = 749
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = -1
Query: 296 KMSSFCPGVDPYSISNLCGTLFVAISLSAVTRLMCKLRRCSGVYNRFDHSTGVYSLSKST 117
++S F + +S+ GTL + ++A++ ++C G++ +F ++ +SK
Sbjct: 445 QLSIFFSSLIVFSVVIFLGTLLETLPMAALSAIICV--ALQGMFRKFADLIDLWKVSKID 502
Query: 116 NSMVTVPCI 90
++ V C+
Sbjct: 503 FTIWVVSCV 511
>AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion
transporter SULP-4 protein.
Length = 749
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = -1
Query: 296 KMSSFCPGVDPYSISNLCGTLFVAISLSAVTRLMCKLRRCSGVYNRFDHSTGVYSLSKST 117
++S F + +S+ GTL + ++A++ ++C G++ +F ++ +SK
Sbjct: 445 QLSIFFSSLIVFSVVIFLGTLLETLPMAALSAIICV--ALQGMFRKFADLIDLWKVSKID 502
Query: 116 NSMVTVPCI 90
++ V C+
Sbjct: 503 FTIWVVSCV 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,944
Number of Sequences: 27780
Number of extensions: 309027
Number of successful extensions: 823
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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