Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312E03f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1094 - 34478538-34478624,34478860-34478931,34479154-344792... 38 0.006
12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691 34 0.060
11_01_0156 - 1290361-1290876,1291095-1291201,1292027-1292105,129... 34 0.060
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 33 0.11
02_01_0650 - 4838977-4839078,4839179-4839196,4839371-4839528,483... 33 0.11
03_02_0850 + 11775232-11776077,11776761-11777321 33 0.14
03_01_0053 + 457622-458191,458328-458393,458734-458978,459393-45... 33 0.14
07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026 33 0.18
06_03_1144 - 27980216-27980896,27981682-27982048,27983499-279836... 32 0.24
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 31 0.56
01_06_0358 - 28677781-28677901,28678327-28678430,28678542-286786... 31 0.74
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 29 1.7
02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952 29 2.3
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 28 4.0
02_04_0254 - 21314861-21315805 28 5.2
02_04_0252 - 21305834-21306778 28 5.2
02_04_0250 - 21287782-21288726 28 5.2
02_04_0248 - 21278756-21279700 28 5.2
02_04_0246 - 21269730-21270674 28 5.2
08_02_1616 + 28260204-28262555 27 6.9
11_04_0472 - 18137307-18137542,18137660-18137933,18138182-181383... 27 9.1
05_07_0193 - 28319783-28320211,28320798-28320925,28321543-283218... 27 9.1
04_03_1034 - 21865633-21865811,21865838-21865860,21866345-218664... 27 9.1
>01_06_1094 -
34478538-34478624,34478860-34478931,34479154-34479222,
34479312-34479422,34480390-34480528,34480590-34480705,
34480821-34480968,34481058-34481215,34481654-34481827,
34482592-34483056
Length = 512
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/33 (45%), Positives = 26/33 (78%)
Frame = +1
Query: 421 ARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
ARL++A+ SG IPV++ D + LP+E +LD+++
Sbjct: 369 ARLFDAIVSGCIPVIV-SDELELPFEGILDYRK 400
>12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691
Length = 461
Score = 34.3 bits (75), Expect = 0.060
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
RL++A+ S +PV++ D I LPYE+ LD+ +
Sbjct: 346 RLFDAIVSHCVPVIISDD-IELPYEDALDYSK 376
>11_01_0156 -
1290361-1290876,1291095-1291201,1292027-1292105,
1292609-1293523
Length = 538
Score = 34.3 bits (75), Expect = 0.060
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
RL++A+ S +PV++ D I LPYE+ LD+ +
Sbjct: 422 RLFDAIVSHCVPVIISDD-IELPYEDALDYSK 452
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDW 513
RL++A+ S +PV++ D I LP+E+VLD+
Sbjct: 467 RLFDAIVSHCVPVIISDD-IELPFEDVLDY 495
>02_01_0650 -
4838977-4839078,4839179-4839196,4839371-4839528,
4839663-4839895,4840345-4840631,4841391-4841819
Length = 408
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 421 ARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
AR+ +++ G +PV+L D LP+ ++LDW++
Sbjct: 304 ARISDSIHYGCVPVILS-DYYDLPFNDILDWRK 335
>03_02_0850 + 11775232-11776077,11776761-11777321
Length = 468
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
RL++++ S +P+++ D I LP+E+VLD+ +
Sbjct: 337 RLFDSIVSHCVPIIIS-DEIELPFEDVLDYSK 367
>03_01_0053 +
457622-458191,458328-458393,458734-458978,459393-459861
Length = 449
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDW 513
RL E++ G IPV++ D IRLP+ VL W
Sbjct: 342 RLVESVLLGCIPVIIADD-IRLPFPSVLQW 370
>07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026
Length = 453
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDWK 516
RL++AL S +PV++ D I LP+E+V+D++
Sbjct: 325 RLFDALVSLCVPVIVS-DYIELPFEDVIDYR 354
>06_03_1144 -
27980216-27980896,27981682-27982048,27983499-27983644,
27983872-27984111
Length = 477
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 409 ALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
A R+ EA+ +G +PV++ P+ +VLDW R
Sbjct: 371 AAASRRVVEAITAGCVPVLVDDGGYSPPFSDVLDWAR 407
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 34 RPGFDVITPPALGPPGGDVWADCAPISPARRKYLLSFQGLQPPPKGL 174
RPGF V PP +GPP P+ P YL +G+ PPP L
Sbjct: 23 RPGFPVAPPPPMGPP------PPPPMPPVPVMYL---RGVPPPPPWL 60
>01_06_0358 -
28677781-28677901,28678327-28678430,28678542-28678625,
28679221-28679265,28679523-28679594,28679721-28679759,
28679966-28680061,28680492-28680566,28681717-28681764,
28681888-28681971,28682141-28682341,28682394-28682561,
28683232-28683372,28683470-28683517,28683845-28684087,
28684184-28684297,28685134-28685163,28685361-28685951,
28686033-28686620,28686744-28686863,28687764-28687938,
28688397-28688562,28688653-28688755,28689227-28689319,
28690759-28690918,28691754-28691872
Length = 1275
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 178 KDQDGTLISLLEKMVKTAPASDVFFLQFECDPP 276
K+ + ISL ++ + PASD F +F CD P
Sbjct: 744 KNYENFFISLARSLIHSLPASDKSFSKFLCDAP 776
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 424 RLYEALRSGAIPVVLGGDRIRLPYEEVLDW 513
R+ EA+ +PVV+G D LP+ +VL+W
Sbjct: 503 RVVEAIYLECVPVVIGDD-YTLPFADVLNW 531
>02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952
Length = 206
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = -1
Query: 509 SNTSSYGRRILSPPRTT--GIAPDLSASYNLACSRAVVT*FRSAGASMSTKVESRNTARL 336
+ +SS GRR L PP TT P L +L+ S + + S G ST +
Sbjct: 11 ATSSSSGRRSLPPPTTTFPRPPPPLRRHRHLSSSSSSASSTESDGGGGSTNGSLPGLPPV 70
Query: 335 DLSVPQSAQSPIGKVTRFSTGGSHSNCRKKTSDAGAVFTI 216
+ + P+ VT F T + ++ GA+ +
Sbjct: 71 VVEEEEEEFCPVECVTEFKTEEELARVLERAKATGALVVV 110
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -1
Query: 380 ASMSTKVESRNTARLDLSVPQSAQSPIGKVTRFSTGGSHSNCR-KKTSDAGAVFTIFSSN 204
A+ +T +E + ++ Q+ Q P+ +ST G S R + S VF++ + +
Sbjct: 70 AAANTMIEDLKRSSSADTMEQTKQ-PLSCARSWSTCGKSSKQRGRNNSSVTPVFSLAARS 128
Query: 203 DINVPS*SLSNPLGGGCKP*KLSKYF 126
N P+GGGC+ + +F
Sbjct: 129 GPNAWCGVAQAPVGGGCRQGECPNFF 154
>02_04_0254 - 21314861-21315805
Length = 314
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 482 ILSPPRTTGIAPDLSASYNLACSRAVVT*FRSAGA-SMSTKVESRNTARLDLSVPQSAQS 306
++ PP + P+ ASY ++ +V+ GA +++ E R+T L + +P+SA S
Sbjct: 169 VVPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRST--LVIEIPESAAS 226
>02_04_0252 - 21305834-21306778
Length = 314
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 482 ILSPPRTTGIAPDLSASYNLACSRAVVT*FRSAGA-SMSTKVESRNTARLDLSVPQSAQS 306
++ PP + P+ ASY ++ +V+ GA +++ E R+T L + +P+SA S
Sbjct: 169 VVPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRST--LVIEIPESAAS 226
>02_04_0250 - 21287782-21288726
Length = 314
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 482 ILSPPRTTGIAPDLSASYNLACSRAVVT*FRSAGA-SMSTKVESRNTARLDLSVPQSAQS 306
++ PP + P+ ASY ++ +V+ GA +++ E R+T L + +P+SA S
Sbjct: 169 VVPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRST--LVIEIPESAAS 226
>02_04_0248 - 21278756-21279700
Length = 314
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 482 ILSPPRTTGIAPDLSASYNLACSRAVVT*FRSAGA-SMSTKVESRNTARLDLSVPQSAQS 306
++ PP + P+ ASY ++ +V+ GA +++ E R+T L + +P+SA S
Sbjct: 169 VVPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRST--LVIEIPESAAS 226
>02_04_0246 - 21269730-21270674
Length = 314
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 482 ILSPPRTTGIAPDLSASYNLACSRAVVT*FRSAGA-SMSTKVESRNTARLDLSVPQSAQS 306
++ PP + P+ ASY ++ +V+ GA +++ E R+T L + +P+SA S
Sbjct: 169 VVPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRST--LVIEIPESAAS 226
>08_02_1616 + 28260204-28262555
Length = 783
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 380 RLLIGITLQQLYYRLDCMKRSDLVLYLSS*AVTEFVCH 493
R +IG T + +RL ++++DLV L A++E H
Sbjct: 54 RFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTH 91
>11_04_0472 -
18137307-18137542,18137660-18137933,18138182-18138303,
18139158-18139370,18139475-18139724
Length = 364
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 329 SVPQSAQSPIGKVTRFSTGGSHSNCRKKTSDAGAVFTI--FSSNDIN 195
SVP S+Q + ST SH +C KK S GA+F + ND N
Sbjct: 132 SVPLSSQLDWFRSHLNSTCSSHQDCAKKLS--GALFLVGEIGGNDYN 176
>05_07_0193 -
28319783-28320211,28320798-28320925,28321543-28321888,
28322386-28322454
Length = 323
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 82 GDVWADCAPISPARRKYLLSFQGL 153
GD W D AP++P R LS +GL
Sbjct: 288 GDEWDDEAPLTPTRHMPNLSSKGL 311
>04_03_1034 -
21865633-21865811,21865838-21865860,21866345-21866433,
21872484-21872894,21872968-21873284,21873389-21873467,
21873539-21873903,21874484-21874656,21874824-21874913,
21875797-21875862,21876615-21876661
Length = 612
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 127 KYLLSFQGLQPPPKGLDKDQDGTLISLLEKMVKTAPASDVFFLQFECDPPVEKR 288
K LL+ QGL +GL+ +GT + +K+ K P D+ DP + KR
Sbjct: 244 KDLLNGQGLPKLRRGLE---NGTTDDVRKKLKKGEPIDDLLLRPTADDPSLSKR 294
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,969,906
Number of Sequences: 37544
Number of extensions: 365229
Number of successful extensions: 1039
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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