Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E03f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    26   0.67 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.2  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   6.2  

>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 122 LAGDIGAQSAQTSPPGGPSAGGVITSKPG 36
           L GD G       P  GPS  G  T+ PG
Sbjct: 313 LVGDSGITGVPPIPADGPSPAGPYTNVPG 341


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +1

Query: 52  ITPPALGPPGGDVWADCAPISPARRKYLLSFQGL---QPPP 165
           I P  L PP   + A   P++PA+ ++   F  L   QPPP
Sbjct: 543 IPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP 583


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 150  TLKTEQVLSSCGRYRRTICPNITTRRA*CRWC 55
            T    QVLS  G +R  +C N  T    C+ C
Sbjct: 976  TFHLAQVLSGHGFFRDYLCHNGFTSSPDCQLC 1007


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 262 RTAEKKHQTLVLFSPFFLAMISTFHLDPCLIL*AVVVNPEN 140
           RTA    +   LFS  F  M      DP LI   ++  PEN
Sbjct: 421 RTASTPVEICELFSAHFSQMFEPPVSDPNLIEGGLLYTPEN 461


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 135  QVLSSCGRYRRTICPNITTRRA*CRWCDYIKTWSKMIVRKC 13
            QVLS  G +R  +C N  T    C+ C  +   ++  + +C
Sbjct: 918  QVLSGHGFFRDYLCRNGFTSSPDCQRCSGVPETAEHAMFEC 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,528
Number of Sequences: 2352
Number of extensions: 12624
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)