SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312E03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132161-1|AAD34749.1|  972|Drosophila melanogaster unknown prot...   188   3e-48
AE013599-2818|AAF57601.1|  972|Drosophila melanogaster CG15110-P...   188   3e-48
AB077850-1|BAB89399.1|  972|Drosophila melanogaster heparan sulf...   188   3e-48
BT021403-1|AAX33551.1|  760|Drosophila melanogaster LD10920p pro...    36   0.044
AF083889-1|AAC32397.1|  760|Drosophila melanogaster putative tum...    36   0.044
AE013599-1906|AAF58236.1|  760|Drosophila melanogaster CG10117-P...    36   0.044
AB221351-1|BAE78509.1|  760|Drosophila melanogaster Tout-velu pr...    36   0.044

>AF132161-1|AAD34749.1|  972|Drosophila melanogaster unknown
           protein.
          Length = 972

 Score =  188 bits (459), Expect = 3e-48
 Identities = 89/173 (51%), Positives = 116/173 (67%)
 Frame = +1

Query: 1   LAQSTFTHNHFRPGFDVITPPALGPPGGDVWADCAPISPARRKYLLSFQGLQPPPKGLDK 180
           + QS F    FRPG+D+I PP LGPPGGDVW +CA + PARRKYLL++QG   P +    
Sbjct: 361 VVQSAFEREQFRPGYDLIVPPILGPPGGDVWQECAEMVPARRKYLLTYQGELRPKQSSLN 420

Query: 181 DQDGTLISLLEKMVKTAPASDVFFLQFECDPPVEKRVTLPIGDWALCGTDRSRRAVLRDS 360
             D  ++  L  M K A   D F LQF+C P  E++    + DW LCG+D SRR +L+DS
Sbjct: 421 PLDAFILEHLADMAKGA-TQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDS 479

Query: 361 TFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           TF LIL P +   V++ L+ AR+YEALRSGA+PV+LG D +RLPY E +DW+R
Sbjct: 480 TFSLILPPLN-GRVSSTLMLARIYEALRSGAVPVILGADELRLPYAETVDWRR 531


>AE013599-2818|AAF57601.1|  972|Drosophila melanogaster CG15110-PA
           protein.
          Length = 972

 Score =  188 bits (459), Expect = 3e-48
 Identities = 89/173 (51%), Positives = 116/173 (67%)
 Frame = +1

Query: 1   LAQSTFTHNHFRPGFDVITPPALGPPGGDVWADCAPISPARRKYLLSFQGLQPPPKGLDK 180
           + QS F    FRPG+D+I PP LGPPGGDVW +CA + PARRKYLL++QG   P +    
Sbjct: 361 VVQSAFEREQFRPGYDLIVPPILGPPGGDVWQECAEMVPARRKYLLTYQGELRPKQSSLN 420

Query: 181 DQDGTLISLLEKMVKTAPASDVFFLQFECDPPVEKRVTLPIGDWALCGTDRSRRAVLRDS 360
             D  ++  L  M K A   D F LQF+C P  E++    + DW LCG+D SRR +L+DS
Sbjct: 421 PLDAFILEHLADMAKGA-TQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDS 479

Query: 361 TFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           TF LIL P +   V++ L+ AR+YEALRSGA+PV+LG D +RLPY E +DW+R
Sbjct: 480 TFSLILPPLN-GRVSSTLMLARIYEALRSGAVPVILGADELRLPYAETVDWRR 531


>AB077850-1|BAB89399.1|  972|Drosophila melanogaster heparan sulfate
           GlcNAc transferase-I/II protein.
          Length = 972

 Score =  188 bits (459), Expect = 3e-48
 Identities = 89/173 (51%), Positives = 116/173 (67%)
 Frame = +1

Query: 1   LAQSTFTHNHFRPGFDVITPPALGPPGGDVWADCAPISPARRKYLLSFQGLQPPPKGLDK 180
           + QS F    FRPG+D+I PP LGPPGGDVW +CA + PARRKYLL++QG   P +    
Sbjct: 361 VVQSAFEREQFRPGYDLIVPPILGPPGGDVWQECAEMVPARRKYLLTYQGELRPKQSSLN 420

Query: 181 DQDGTLISLLEKMVKTAPASDVFFLQFECDPPVEKRVTLPIGDWALCGTDRSRRAVLRDS 360
             D  ++  L  M K A   D F LQF+C P  E++    + DW LCG+D SRR +L+DS
Sbjct: 421 PLDAFILEHLADMAKGA-TQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDS 479

Query: 361 TFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           TF LIL P +   V++ L+ AR+YEALRSGA+PV+LG D +RLPY E +DW+R
Sbjct: 480 TFSLILPPLN-GRVSSTLMLARIYEALRSGAVPVILGADELRLPYAETVDWRR 531


>BT021403-1|AAX33551.1|  760|Drosophila melanogaster LD10920p
           protein.
          Length = 760

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 346 VLRDSTFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           +L++STF L+  P  R      L   R  EAL++G IPV+L    + LP+E  +DWK+
Sbjct: 324 LLQNSTFCLV--PRGRR-----LGSFRFLEALQAGCIPVLLSNAWV-LPFESKIDWKQ 373


>AF083889-1|AAC32397.1|  760|Drosophila melanogaster putative tumor
           suppressor homolog protein.
          Length = 760

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 346 VLRDSTFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           +L++STF L+  P  R      L   R  EAL++G IPV+L    + LP+E  +DWK+
Sbjct: 324 LLQNSTFCLV--PRGRR-----LGSFRFLEALQAGCIPVLLSNAWV-LPFESKIDWKQ 373


>AE013599-1906|AAF58236.1|  760|Drosophila melanogaster CG10117-PA
           protein.
          Length = 760

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 346 VLRDSTFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           +L++STF L+  P  R      L   R  EAL++G IPV+L    + LP+E  +DWK+
Sbjct: 324 LLQNSTFCLV--PRGRR-----LGSFRFLEALQAGCIPVLLSNAWV-LPFESKIDWKQ 373


>AB221351-1|BAE78509.1|  760|Drosophila melanogaster Tout-velu
           protein.
          Length = 760

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 346 VLRDSTFVLILAPADRNYVTTALLQARLYEALRSGAIPVVLGGDRIRLPYEEVLDWKR 519
           +L++STF L+  P  R      L   R  EAL++G IPV+L    + LP+E  +DWK+
Sbjct: 324 LLQNSTFCLV--PRGRR-----LGSFRFLEALQAGCIPVLLSNAWV-LPFESKIDWKQ 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,060,550
Number of Sequences: 53049
Number of extensions: 589284
Number of successful extensions: 1590
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -