Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D12f
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   4.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 182 CGTRWSISDITLIGTTTASLQGTEPLKTRLNATSLQVTSFG 304
           C T+  ++  T +  T   L  TEP+ T+  A S  +   G
Sbjct: 201 CRTKHRLTGETRLSATKGRLVITEPVGTKAPAFSTDIKVLG 241


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 388 CRKCNIKFNTMAHAIHH 438
           C KC  +F    H +HH
Sbjct: 249 CDKCRGRFRRRHHLVHH 265


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 288 CNEVAFSRVLSGSVPCSDAVVVPINVISEM 199
           CNE + S   +    C+  V +P+  + EM
Sbjct: 490 CNESSVSNCENEYCECTHVVNIPLGTVVEM 519


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 91  INHLICKYYILQISIV 138
           IN +   YYILQI+++
Sbjct: 164 INDMCSLYYILQITLI 179


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 229 DSIATGNRAAQNSTERNFITSDVI 300
           D  A   R     T RNF+T DVI
Sbjct: 204 DEPAYQYRGIALDTSRNFVTVDVI 227


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 226 NDSIATGNRAAQNSTERNFITSDVIW 303
           N +IAT   A   +    FI+ D +W
Sbjct: 98  NRNIATNESADPLAFHTLFISKDAVW 123


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -3

Query: 147 IMLYYAYL*YVVFTY*MIYTQPSLYRYC 64
           + +YY Y  +++FT  +++     + +C
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFC 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,028
Number of Sequences: 336
Number of extensions: 2188
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)