Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D12f
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102649-1|AAM27478.1|  176|Drosophila melanogaster GH01072p pro...    33   0.27 
AE014296-3052|AAF49235.1|  176|Drosophila melanogaster CG6884-PA...    33   0.27 
AE014297-159|AAG22217.1|  381|Drosophila melanogaster CG1126-PA ...    28   7.6  

>AY102649-1|AAM27478.1|  176|Drosophila melanogaster GH01072p
           protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 115 YILQISIVQ-HNGTGFAVSESYSL-WHSLVHLRYNVNRNNDSIATGNRAAQNSTER 276
           Y+ Q+S  Q H G+G+A ++   + WH + H R  V    ++ A  + AA+   +R
Sbjct: 65  YLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKHSHAARQQLKR 120


>AE014296-3052|AAF49235.1|  176|Drosophila melanogaster CG6884-PA
           protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 115 YILQISIVQ-HNGTGFAVSESYSL-WHSLVHLRYNVNRNNDSIATGNRAAQNSTER 276
           Y+ Q+S  Q H G+G+A ++   + WH + H R  V    ++ A  + AA+   +R
Sbjct: 65  YLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKHSHAARQQLKR 120


>AE014297-159|AAG22217.1|  381|Drosophila melanogaster CG1126-PA
           protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 181 LWHSLVHLRYNVNRNNDSIATGNRAAQNSTERNFITSDVIW 303
           +WHSLVH +YN++     I   N    +   +  I S  ++
Sbjct: 70  IWHSLVHKKYNLSIGYARIGNTNTRVVHMHSKARIASQALY 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,354,521
Number of Sequences: 53049
Number of extensions: 346401
Number of successful extensions: 903
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)