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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40427-3|AAA81469.1|  320|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z37139-2|CAA85486.1|  384|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U40419-6|AAL02445.2|  408|Caenorhabditis elegans Hypothetical pr...    28   3.5  
X69016-1|CAA48781.1|  549|Caenorhabditis elegans ced-4 protein.        28   4.7  
U21324-1|AAA62564.1|  549|Caenorhabditis elegans Cell death abno...    28   4.7  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81557-11|CAB04531.2|  319|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z81079-3|CAB03083.2|  588|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z54235-3|CAA90973.2|  288|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U40427-3|AAA81469.1|  320|Caenorhabditis elegans Hypothetical
           protein F43C9.1 protein.
          Length = 320

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = +3

Query: 102 LSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELV 212
           +S++ LP+E++  + +N + Q+I    S C+ FN ++
Sbjct: 1   MSMHQLPSEMLRSVFQNVNSQDIPKLRSVCQMFNSVI 37


>Z37139-2|CAA85486.1|  384|Caenorhabditis elegans Hypothetical
           protein C14B1.3 protein.
          Length = 384

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 114 SLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKE 239
           ++P E  S I +  D + +LN    C  FN+L+++D   W E
Sbjct: 26  TVPNECFSPIFRRLDKKSLLNCQLACHRFNDLISSD-SFWIE 66


>Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical
           protein K08C7.7 protein.
          Length = 298

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 96  EELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQ 224
           E   I  LP E+I  +LKN   +E+ + + TCK  + L+  ++
Sbjct: 4   ENFPILELPPELILHVLKNYCYEELNDITVTCKTLHALIEENR 46


>U40419-6|AAL02445.2|  408|Caenorhabditis elegans Hypothetical
           protein C27F2.7 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 117 LPAEVISIILKNNDCQEILNFSSTCKHFNEL 209
           LP   I  I+   D Q +LN S TC H  +L
Sbjct: 130 LPDTDICQIMSFLDAQSLLNLSQTCSHLRQL 160


>X69016-1|CAA48781.1|  549|Caenorhabditis elegans ced-4 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/73 (21%), Positives = 36/73 (49%)
 Frame = +3

Query: 30  SGWSSKSITTTS*DLRKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNEL 209
           SG + KS      D+  +   +++L  +     V S++LK   C  +++  +T   F+++
Sbjct: 193 SGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDV 252

Query: 210 VNTDQQLWKEKLK 248
           V  +   W ++L+
Sbjct: 253 VQEETIRWAQELR 265


>U21324-1|AAA62564.1|  549|Caenorhabditis elegans Cell death
           abnormality protein4, isoform a protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/73 (21%), Positives = 36/73 (49%)
 Frame = +3

Query: 30  SGWSSKSITTTS*DLRKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNEL 209
           SG + KS      D+  +   +++L  +     V S++LK   C  +++  +T   F+++
Sbjct: 193 SGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDV 252

Query: 210 VNTDQQLWKEKLK 248
           V  +   W ++L+
Sbjct: 253 VQEETIRWAQELR 265


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 348 VFSELKTMSPTHYCKRDDLTKQDVRDFFNVAISTKMSLAYAINIL 482
           VF+ +   +  HY   +D    DV   FN  I+  M  +Y  N+L
Sbjct: 755 VFNRIAAQTNGHYIVANDTIGVDVNSDFNKIIANFMKTSYNQNLL 799


>Z81557-11|CAB04531.2|  319|Caenorhabditis elegans Hypothetical
           protein F59A1.7 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +3

Query: 105 SIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPD 263
           S+ ++P ++I  +++N    + L+    C++F E+VN     +K    +L  D
Sbjct: 19  SMSNMPLDIIHKMVENVKPIDRLSLRKVCRNFREIVNDKDPGFKRLRLDLFKD 71


>Z81079-3|CAB03083.2|  588|Caenorhabditis elegans Hypothetical
           protein F39H11.3 protein.
          Length = 588

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 348 VFSELKTMSPTHYCKRDDLTKQD 416
           +F+EL T  P  +CK +D+  Q+
Sbjct: 232 IFAELLTAEPLFFCKEEDIKAQN 254


>Z54235-3|CAA90973.2|  288|Caenorhabditis elegans Hypothetical
           protein C09G9.3 protein.
          Length = 288

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +3

Query: 186 TCKHFNELVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKG 326
           TC  F+  ++    ++  ++  L  D   V VE  C +G+W+   +G
Sbjct: 132 TCSSFDTTLDLRAGIFGNQIYYLNGDVDTVTVEFTCQNGEWIYTDQG 178


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 150 NNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELI 257
           N    ++ N     +  N+++  DQQ+WK ++++LI
Sbjct: 484 NEKVNKLANELKDEREINQMLRKDQQVWKGQVEKLI 519


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,016,541
Number of Sequences: 27780
Number of extensions: 208886
Number of successful extensions: 471
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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