BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS312D08f (521 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40427-3|AAA81469.1| 320|Caenorhabditis elegans Hypothetical pr... 31 0.38 Z37139-2|CAA85486.1| 384|Caenorhabditis elegans Hypothetical pr... 31 0.66 Z70286-3|CAA94296.1| 298|Caenorhabditis elegans Hypothetical pr... 30 1.2 U40419-6|AAL02445.2| 408|Caenorhabditis elegans Hypothetical pr... 28 3.5 X69016-1|CAA48781.1| 549|Caenorhabditis elegans ced-4 protein. 28 4.7 U21324-1|AAA62564.1| 549|Caenorhabditis elegans Cell death abno... 28 4.7 Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z81557-11|CAB04531.2| 319|Caenorhabditis elegans Hypothetical p... 27 6.2 Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 27 8.1 Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical pr... 27 8.1 U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 27 8.1 >U40427-3|AAA81469.1| 320|Caenorhabditis elegans Hypothetical protein F43C9.1 protein. Length = 320 Score = 31.5 bits (68), Expect = 0.38 Identities = 11/37 (29%), Positives = 24/37 (64%) Frame = +3 Query: 102 LSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELV 212 +S++ LP+E++ + +N + Q+I S C+ FN ++ Sbjct: 1 MSMHQLPSEMLRSVFQNVNSQDIPKLRSVCQMFNSVI 37 >Z37139-2|CAA85486.1| 384|Caenorhabditis elegans Hypothetical protein C14B1.3 protein. Length = 384 Score = 30.7 bits (66), Expect = 0.66 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 114 SLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKE 239 ++P E S I + D + +LN C FN+L+++D W E Sbjct: 26 TVPNECFSPIFRRLDKKSLLNCQLACHRFNDLISSD-SFWIE 66 >Z70286-3|CAA94296.1| 298|Caenorhabditis elegans Hypothetical protein K08C7.7 protein. Length = 298 Score = 29.9 bits (64), Expect = 1.2 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +3 Query: 96 EELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQ 224 E I LP E+I +LKN +E+ + + TCK + L+ ++ Sbjct: 4 ENFPILELPPELILHVLKNYCYEELNDITVTCKTLHALIEENR 46 >U40419-6|AAL02445.2| 408|Caenorhabditis elegans Hypothetical protein C27F2.7 protein. Length = 408 Score = 28.3 bits (60), Expect = 3.5 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 Query: 117 LPAEVISIILKNNDCQEILNFSSTCKHFNEL 209 LP I I+ D Q +LN S TC H +L Sbjct: 130 LPDTDICQIMSFLDAQSLLNLSQTCSHLRQL 160 >X69016-1|CAA48781.1| 549|Caenorhabditis elegans ced-4 protein. Length = 549 Score = 27.9 bits (59), Expect = 4.7 Identities = 16/73 (21%), Positives = 36/73 (49%) Frame = +3 Query: 30 SGWSSKSITTTS*DLRKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNEL 209 SG + KS D+ + +++L + V S++LK C +++ +T F+++ Sbjct: 193 SGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDV 252 Query: 210 VNTDQQLWKEKLK 248 V + W ++L+ Sbjct: 253 VQEETIRWAQELR 265 >U21324-1|AAA62564.1| 549|Caenorhabditis elegans Cell death abnormality protein4, isoform a protein. Length = 549 Score = 27.9 bits (59), Expect = 4.7 Identities = 16/73 (21%), Positives = 36/73 (49%) Frame = +3 Query: 30 SGWSSKSITTTS*DLRKIHIMDEELSIYSLPAEVISIILKNNDCQEILNFSSTCKHFNEL 209 SG + KS D+ + +++L + V S++LK C +++ +T F+++ Sbjct: 193 SGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDV 252 Query: 210 VNTDQQLWKEKLK 248 V + W ++L+ Sbjct: 253 VQEETIRWAQELR 265 >Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical protein C49C3.4 protein. Length = 1566 Score = 27.5 bits (58), Expect = 6.2 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +3 Query: 348 VFSELKTMSPTHYCKRDDLTKQDVRDFFNVAISTKMSLAYAINIL 482 VF+ + + HY +D DV FN I+ M +Y N+L Sbjct: 755 VFNRIAAQTNGHYIVANDTIGVDVNSDFNKIIANFMKTSYNQNLL 799 >Z81557-11|CAB04531.2| 319|Caenorhabditis elegans Hypothetical protein F59A1.7 protein. Length = 319 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/53 (24%), Positives = 28/53 (52%) Frame = +3 Query: 105 SIYSLPAEVISIILKNNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELIPD 263 S+ ++P ++I +++N + L+ C++F E+VN +K +L D Sbjct: 19 SMSNMPLDIIHKMVENVKPIDRLSLRKVCRNFREIVNDKDPGFKRLRLDLFKD 71 >Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical protein F39H11.3 protein. Length = 588 Score = 27.1 bits (57), Expect = 8.1 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +3 Query: 348 VFSELKTMSPTHYCKRDDLTKQD 416 +F+EL T P +CK +D+ Q+ Sbjct: 232 IFAELLTAEPLFFCKEEDIKAQN 254 >Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical protein C09G9.3 protein. Length = 288 Score = 27.1 bits (57), Expect = 8.1 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = +3 Query: 186 TCKHFNELVNTDQQLWKEKLKELIPDAAFVVVESDCHDGDWLEEIKG 326 TC F+ ++ ++ ++ L D V VE C +G+W+ +G Sbjct: 132 TCSSFDTTLDLRAGIFGNQIYYLNGDVDTVTVEFTCQNGEWIYTDQG 178 >U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical protein EEED8.16 protein. Length = 590 Score = 27.1 bits (57), Expect = 8.1 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +3 Query: 150 NNDCQEILNFSSTCKHFNELVNTDQQLWKEKLKELI 257 N ++ N + N+++ DQQ+WK ++++LI Sbjct: 484 NEKVNKLANELKDEREINQMLRKDQQVWKGQVEKLI 519 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,016,541 Number of Sequences: 27780 Number of extensions: 208886 Number of successful extensions: 471 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 464 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 471 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1017709248 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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