Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D07f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F21392 Cluster: PREDICTED: similar to transposas...    34   2.3  
UniRef50_Q1IYF0 Cluster: Acriflavin resistance protein; n=1; Dei...    32   9.2  
UniRef50_A1IBH3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_UPI0000F21392 Cluster: PREDICTED: similar to transposase;
           n=1; Danio rerio|Rep: PREDICTED: similar to transposase
           - Danio rerio
          Length = 153

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -3

Query: 159 KIYTKLIKATFLKNPTLSSEINKEKLLGTYLLPPRTGYP*MDSTALKKK 13
           K Y  + K T L   T+ S I K K+LGT +  PR+G P   S  +++K
Sbjct: 23  KGYKSISKITGLHQSTIRSIIRKWKMLGTVMNRPRSGRPTKISPKMQRK 71


>UniRef50_Q1IYF0 Cluster: Acriflavin resistance protein; n=1;
           Deinococcus geothermalis DSM 11300|Rep: Acriflavin
           resistance protein - Deinococcus geothermalis (strain
           DSM 11300)
          Length = 1123

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/41 (34%), Positives = 28/41 (68%)
 Frame = -3

Query: 423 DQLKRSGRSELRILKSSVSVLSANTVLICTSVEFLFIPNPS 301
           D LK+   + + +++ + +VLSA++ L  T++E  F+PNP+
Sbjct: 751 DLLKKRAAAAVDVIEQNPNVLSASSSLDNTTLENQFVPNPA 791


>UniRef50_A1IBH3 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
           uncharacterized protein - Candidatus Desulfococcus
           oleovorans Hxd3
          Length = 309

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 444 LEAKQRTDQLKRSGRSELRILKSSVSVLSANTVLICTSVEFLFIPNPSP 298
           L+A ++ +Q+    RSEL     S+   + NT+ +C +  F F+ NP P
Sbjct: 262 LKAFEQENQIIEKFRSELT---QSMQTKNINTIYLCNTTPFYFLSNPFP 307


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,534,800
Number of Sequences: 1657284
Number of extensions: 8528526
Number of successful extensions: 18062
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18062
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)