Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 21  LTLWNPFTDT 50
           + +WNP TDT
Sbjct: 529 VNIWNPLTDT 538


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 163 NKNIYEANKSNVLKKSDPV 107
           NKN+  A+ S V  K +PV
Sbjct: 61  NKNVSRADHSPVFGKVEPV 79


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 192 QPQDVKINLIVHTH 233
           +PQ++  NL  H H
Sbjct: 44  KPQNINANLCTHVH 57


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 145 LRIYFCLDVSLSVIFDN 195
           L I++C + S+  +FDN
Sbjct: 72  LVIFYCQEGSVDFLFDN 88


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 145 LRIYFCLDVSLSVIFDN 195
           L I++C + S+  +FDN
Sbjct: 305 LVIFYCQEGSVDFLFDN 321


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 145 LRIYFCLDVSLSVIFDN 195
           L I++C + S+  +FDN
Sbjct: 305 LVIFYCQEGSVDFLFDN 321


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 120 FLRTLLLLASYIFLFRC 170
           FL + + L S IFLF C
Sbjct: 235 FLISNISLVSLIFLFNC 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,821
Number of Sequences: 336
Number of extensions: 2410
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)