Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   3.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.7  

>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 181 SYFDRTYTVDIASPSGEARMRDMPIA 258
           SYF+        +PSGE   +D+P A
Sbjct: 40  SYFECLLGTGKCTPSGEELKKDIPDA 65


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 197 LTPSILHPHLER 232
           + PS+++PHL R
Sbjct: 239 MAPSVMYPHLNR 250



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/22 (27%), Positives = 11/22 (50%)
 Frame = +1

Query: 19  DHVEFSVSFQDMSPQYRNFSYH 84
           +H  +   +Q   P Y ++ YH
Sbjct: 373 NHQNYVQGYQGEHPNYNHYGYH 394


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 197 LTPSILHPHLER 232
           + PS+++PHL R
Sbjct: 187 MAPSVMYPHLNR 198



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/22 (27%), Positives = 11/22 (50%)
 Frame = +1

Query: 19  DHVEFSVSFQDMSPQYRNFSYH 84
           +H  +   +Q   P Y ++ YH
Sbjct: 321 NHQNYVQGYQGEHPNYNHYGYH 342


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 197 LTPSILHPHLER 232
           + PS+++PHL R
Sbjct: 370 MAPSVMYPHLNR 381


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 349 YCSIDGTRI 375
           +CS DGTRI
Sbjct: 166 FCSADGTRI 174


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 349 YCSIDGTRI 375
           +CS DGTRI
Sbjct: 173 FCSADGTRI 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,821
Number of Sequences: 336
Number of extensions: 3003
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)