Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D05f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1046 - 8246740-8247504                                           29   3.0  
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626...    28   5.2  
01_06_0054 - 26027072-26028463                                         28   5.2  
08_02_0451 + 17297293-17297793,17297866-17298130,17298215-172984...    27   6.9  
11_01_0488 + 3770410-3770774,3771197-3771284,3771383-3771466,377...    27   9.1  
03_01_0392 + 3051469-3051876,3052414-3052832,3053992-3054061,305...    27   9.1  

>01_01_1046 - 8246740-8247504
          Length = 254

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 264 HCCNWHVPHSCLSRW 220
           HCC +H  H+ +SRW
Sbjct: 51  HCCRYHHRHAAVSRW 65


>12_02_0973 +
           24959440-24959451,24959962-24962195,24962539-24962653,
           24963146-24963943,24964140-24964422,24964500-24964951,
           24965744-24965870,24965950-24966074,24966188-24966858,
           24966976-24967093,24967177-24967293,24967564-24967658,
           24968152-24968303,24968858-24968913,24969001-24969218,
           24969842-24970239,24970345-24970628,24970730-24970836,
           24970882-24970968,24971729-24971990,24972228-24972503,
           24973197-24973254,24973437-24973756,24973889-24973999,
           24974183-24974350,24974494-24974622,24974731-24974820,
           24974934-24975040,24975133-24975281,24975584-24975666,
           24975749-24975844,24975957-24976079,24976180-24976263,
           24976371-24976511,24976652-24976951,24977386-24977453,
           24977540-24977642,24979363-24979524,24979613-24981230,
           24981270-24981661,24981689-24981991,24982078-24982161,
           24982296-24982448,24982678-24982841,24982915-24983062,
           24983209-24983331,24983409-24983496,24983686-24983867
          Length = 4177

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/63 (23%), Positives = 27/63 (42%)
 Frame = +1

Query: 19  DHVEFSVSFQDMSPQYRNFSYHTYRLYEYLGYWYTEANPLKLTQNGKMDFKIDFSYFDRT 198
           DH+E +  F    P   NF   T R  +Y   ++   N L +   G++   + F + D  
Sbjct: 725 DHIEANQQFHIFGPMSANFQLSTSR--KYASSFFVTRNILSINLGGRIVGCMAFLFMDDL 782

Query: 199 YTV 207
           + +
Sbjct: 783 FPI 785


>01_06_0054 - 26027072-26028463
          Length = 463

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 374 YIPSVIAATNIPYLDPGT*SCRTSLLNAATG 466
           YIP V+A +   +LD GT    T+L N ATG
Sbjct: 46  YIPIVLALSLASHLDLGTTLIFTALYNFATG 76


>08_02_0451 +
           17297293-17297793,17297866-17298130,17298215-17298410,
           17298437-17298864,17298923-17299200,17299298-17299588
          Length = 652

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 403 YPLSRSWHVVMQDESTQRG 459
           +PLS+SWHVV+ ++    G
Sbjct: 226 FPLSQSWHVVVNEDEEVHG 244


>11_01_0488 +
           3770410-3770774,3771197-3771284,3771383-3771466,
           3772128-3772224,3772324-3772411,3772800-3772848,
           3773044-3773238,3773713-3774159
          Length = 470

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 362 MAQGYIPSVIAATNIPYLDPGT*SCRTSLLNAATGTSWLSCPGGN 496
           M   Y+  + +  +IP    G  S    LL A TGT  LS  G N
Sbjct: 1   MTVAYLKEMPSTPSIPSCTSGMRSVAARLLGAGTGTRPLSFVGSN 45


>03_01_0392 +
           3051469-3051876,3052414-3052832,3053992-3054061,
           3054923-3055016,3056587-3056907,3057298-3057403,
           3058807-3058887,3059336-3059402,3059715-3060239,
           3060328-3060553,3060628-3060967,3061311-3061659,
           3061755-3062357
          Length = 1202

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 373 IHTFSNRSYEYPLSRSWHVVMQDESTQ 453
           +H+  +RSY Y L+  W++V Q    Q
Sbjct: 88  VHSCQDRSYLYLLAMGWNIVYQFRKAQ 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,235,262
Number of Sequences: 37544
Number of extensions: 320003
Number of successful extensions: 836
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)