Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D05f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disea...    30   4.3  
BX005040-2|CAH69939.1| 1347|Homo sapiens family with sequence si...    29   9.9  
AL596385-3|CAI95396.1| 1356|Homo sapiens family with sequence si...    29   9.9  
AL590491-3|CAH70549.1| 1347|Homo sapiens family with sequence si...    29   9.9  
AL353770-3|CAH73359.1| 1347|Homo sapiens family with sequence si...    29   9.9  

>AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disease
           1-like 3 protein.
          Length = 1732

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +1

Query: 310 LVANYFTGHQYQPYCSIDGTRIHTFSNRSYEYPLSRSWHVVMQDESTQR--GNWHELAIL 483
           L+   + G QYQP C+     I    ++ ++     +W  V+  E  Q   G ++  A+L
Sbjct: 555 LLMTLYLGFQYQPNCTHFHLNITLPKDKVWQKDEEYTW--VLNPEHLQHGIGTYYITAVL 612

Query: 484 SRRQQRDQQ 510
           S RQ+  QQ
Sbjct: 613 SERQEGAQQ 621


>BX005040-2|CAH69939.1| 1347|Homo sapiens family with sequence
           similarity 75, member A7 protein.
          Length = 1347

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 179 SRTSIVLTPSILHPHLERHE*GTCQLQQWHLVLCLS 286
           +RTS     S+   HL RH   TCQ++   L L  S
Sbjct: 287 ARTSCAFNSSVQQDHLSRHPPETCQMEAGSLFLLSS 322


>AL596385-3|CAI95396.1| 1356|Homo sapiens family with sequence
           similarity 75, member A4 protein.
          Length = 1356

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 179 SRTSIVLTPSILHPHLERHE*GTCQLQQWHLVLCLS 286
           +RTS     S+   HL RH   TCQ++   L L  S
Sbjct: 296 ARTSCAFNSSVQQDHLSRHPPETCQMEAGSLFLLSS 331


>AL590491-3|CAH70549.1| 1347|Homo sapiens family with sequence
           similarity 75, member A5 protein.
          Length = 1347

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 179 SRTSIVLTPSILHPHLERHE*GTCQLQQWHLVLCLS 286
           +RTS     S+   HL RH   TCQ++   L L  S
Sbjct: 287 ARTSCAFNSSVQQDHLSRHPPETCQMEAGSLFLLSS 322


>AL353770-3|CAH73359.1| 1347|Homo sapiens family with sequence
           similarity 75, member A3 protein.
          Length = 1347

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 179 SRTSIVLTPSILHPHLERHE*GTCQLQQWHLVLCLS 286
           +RTS     S+   HL RH   TCQ++   L L  S
Sbjct: 287 ARTSCAFNSSVQQDHLSRHPPETCQMEAGSLFLLSS 322


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,869,880
Number of Sequences: 237096
Number of extensions: 1830893
Number of successful extensions: 3587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3587
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)