Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.     31   0.72 
BT024409-1|ABC86471.1|  821|Drosophila melanogaster IP03940p pro...    31   0.72 
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA...    31   0.72 
BT001744-1|AAN71499.1| 1012|Drosophila melanogaster RE74040p pro...    30   2.2  
AY128439-1|AAM75032.1| 1012|Drosophila melanogaster LD11251p pro...    30   2.2  
AF188716-1|AAF05591.1| 1012|Drosophila melanogaster alanyl-tRNA ...    30   2.2  
AE014296-934|AAF50804.1| 1012|Drosophila melanogaster CG4633-PA ...    30   2.2  
M38643-1|AAA28939.1|  549|Drosophila melanogaster protein ( D.me...    28   8.8  
M22874-1|AAA28674.1|  583|Drosophila melanogaster nucleic acid-b...    28   8.8  

>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
          Length = 3503

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 277  LSFYQPLKAYELVANYFTGHQYQPYCSIDGTR--IHTFSNRSYEYPLSRSWHVVMQDE 444
            L +    K+YEL+      H  +P CS+   R  +H  ++   ++PL+   H + ++E
Sbjct: 2765 LDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENE 2822


>BT024409-1|ABC86471.1|  821|Drosophila melanogaster IP03940p
           protein.
          Length = 821

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 277 LSFYQPLKAYELVANYFTGHQYQPYCSIDGTR--IHTFSNRSYEYPLSRSWHVVMQDE 444
           L +    K+YEL+      H  +P CS+   R  +H  ++   ++PL+   H + ++E
Sbjct: 83  LDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENE 140


>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
            protein.
          Length = 3556

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 277  LSFYQPLKAYELVANYFTGHQYQPYCSIDGTR--IHTFSNRSYEYPLSRSWHVVMQDE 444
            L +    K+YEL+      H  +P CS+   R  +H  ++   ++PL+   H + ++E
Sbjct: 2818 LDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENE 2875


>BT001744-1|AAN71499.1| 1012|Drosophila melanogaster RE74040p
           protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 253 LACPSFVPLQMGMQYRRCKYDRST 182
           + CP FVP    +Q +RCK+  +T
Sbjct: 413 MECPGFVPAYRELQMQRCKFSNNT 436


>AY128439-1|AAM75032.1| 1012|Drosophila melanogaster LD11251p
           protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 253 LACPSFVPLQMGMQYRRCKYDRST 182
           + CP FVP    +Q +RCK+  +T
Sbjct: 413 MECPGFVPAYRELQMQRCKFSNNT 436


>AF188716-1|AAF05591.1| 1012|Drosophila melanogaster alanyl-tRNA
           synthetase protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 253 LACPSFVPLQMGMQYRRCKYDRST 182
           + CP FVP    +Q +RCK+  +T
Sbjct: 413 MECPGFVPAYRELQMQRCKFSNNT 436


>AE014296-934|AAF50804.1| 1012|Drosophila melanogaster CG4633-PA
           protein.
          Length = 1012

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 253 LACPSFVPLQMGMQYRRCKYDRST 182
           + CP FVP    +Q +RCK+  +T
Sbjct: 413 MECPGFVPAYRELQMQRCKFSNNT 436


>M38643-1|AAA28939.1|  549|Drosophila melanogaster protein (
           D.melanogaster mobileelement jockey gag-specific protein
           gene, complete cds.).
          Length = 549

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 299 KLMNSLPITSLATNINPTVLSMAQGYIPSVIAATNIPYLD 418
           K  + LP+T+    + P   S + GYIP+    TNI Y D
Sbjct: 436 KPRSRLPMTNNIATLKPPQRS-SSGYIPAEALRTNISYAD 474


>M22874-1|AAA28674.1|  583|Drosophila melanogaster nucleic
           acid-binding protiein protein.
          Length = 583

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 299 KLMNSLPITSLATNINPTVLSMAQGYIPSVIAATNIPYLD 418
           K  + LP+T+    + P   S + GYIP+    TNI Y D
Sbjct: 470 KPRSRLPMTNNIATLKPPQRS-SSGYIPAEALRTNISYAD 508


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,232,477
Number of Sequences: 53049
Number of extensions: 534823
Number of successful extensions: 1557
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)