Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312D04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 44 9e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 44 9e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 39 0.002
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 38 0.006
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.006
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.006
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.006
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 38 0.006
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 36 0.023
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 34 0.071
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 33 0.094
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 33 0.094
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 33 0.12
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 33 0.16
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.22
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 32 0.22
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 32 0.22
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.22
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 32 0.22
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 32 0.22
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.22
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 32 0.22
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.22
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 32 0.22
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.22
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.22
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.22
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 31 0.38
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 31 0.38
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 31 0.50
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 0.66
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 0.66
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 31 0.66
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 0.66
AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical ... 30 0.87
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 30 1.2
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 30 1.2
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 30 1.2
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 29 1.5
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 29 1.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 2.0
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 29 2.0
Z81104-2|CAB70254.1| 233|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 29 2.7
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF077539-3|AAC26291.1| 310|Caenorhabditis elegans Hypothetical ... 28 3.5
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 28 3.5
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 28 4.7
U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical p... 28 4.7
U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical p... 28 4.7
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 28 4.7
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 28 4.7
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 28 4.7
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 28 4.7
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 6.2
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 27 6.2
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 27 6.2
U13019-11|AAC24449.1| 445|Caenorhabditis elegans Hypothetical p... 27 6.2
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 27 8.1
U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protei... 27 8.1
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 8.1
U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical pr... 27 8.1
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 27 8.1
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 27 8.1
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 27 8.1
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 27 8.1
L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical pr... 27 8.1
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 27 8.1
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 8.1
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 27 8.1
AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical... 27 8.1
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 27 8.1
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 27 8.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 27 8.1
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 27 8.1
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 8.1
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 27 8.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 8.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 8.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 8.1
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 118 bits (285), Expect = 2e-27
Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = +2
Query: 269 GGSAAERGNRGR--YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFG 442
G A+ NR R YD + E + + PQRSVEGWI+FV+N+HEEA E+D+ ++FSE+G
Sbjct: 20 GRGLAQSRNRERITYDVVDEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYG 79
Query: 443 EIKNIHLNLDRRTGFLKGYALVEYET 520
+IKNIHLNLDRRTGFLKGYALVEYET
Sbjct: 80 KIKNIHLNLDRRTGFLKGYALVEYET 105
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 46.8 bits (106), Expect = 9e-06
Identities = 18/55 (32%), Positives = 37/55 (67%)
Frame = +2
Query: 350 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
++ +E LF+ N+ +E+D+Q F ++GE+ + + +D++TG KG+A+VE+
Sbjct: 273 EKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 362 EGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+G+ ++V NV + EE+I N F+ G + N+ + DR TG +G+A VE+
Sbjct: 4 QGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 212 RLKEKARKRKGRG-FGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSN 388
R +E +R R R +G GGG RG +YD P+ P + L V N
Sbjct: 35 RERESSRSRSPRARYGGGGGGGGGGGRGRNQQYDRENPQ-------PSKC-----LGVFN 82
Query: 389 VHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+ E+D+++ F EFGEI L DR +G +G+ + +
Sbjct: 83 LSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 359 VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+ G+ ++V N + E+D+ N FS+ G + N+ + DR TG +G+A VE+
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 43.6 bits (98), Expect = 9e-05
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
+FV + E ED+ + F+++GE+ + DR G +G+A VE+ T
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT 79
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +2
Query: 194 GEQGIARLKEKARKRKGRGFGN-EAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGW 370
GE A++K + RGF E G + R ++ +G S P +S E
Sbjct: 53 GEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTI--KGKSVEVKPAKSRENK 110
Query: 371 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
+FV + + E+D+++ F +FG++ +I D++T + +A + +E
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 43.6 bits (98), Expect = 9e-05
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
+FV + E ED+ + F+++GE+ + DR G +G+A VE+ T
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT 79
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +2
Query: 194 GEQGIARLKEKARKRKGRGFGN-EAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGW 370
GE A++K + RGF E G + R ++ +G S P +S E
Sbjct: 53 GEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTI--KGKSVEVKPAKSRENK 110
Query: 371 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
+FV + + E+D+++ F +FG++ +I D++T + +A + +E
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
++V N + EE++ N FS G+I N+ + DR TG +G+A +E+
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 371 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
+LFV ++ +ED++ FS FG+I N + DRR+G YA +E++
Sbjct: 242 VLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 290
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 371 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
+LFV ++ +ED++ FS FG+I N + DRR+G YA +E++
Sbjct: 242 VLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 290
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 371 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
+LFV ++ +ED++ FS FG+I N + DRR+G YA +E++
Sbjct: 173 VLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFD 221
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 146 DVLDIENSEEFEVDEDGEQG-IARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAP 322
DVL+IE+ + D +G + ++E+ +K K NE G ++
Sbjct: 10 DVLNIEDMTGDDADLSAIEGDLNEIEEEQKKLKA--IQNEMVGHMNLNTSSQSNSSQSLL 67
Query: 323 EGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYA 502
TP + + ++V NV A E+I+ F G + + + DR +G KG+A
Sbjct: 68 -----TPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFA 122
Query: 503 LVEY 514
VE+
Sbjct: 123 YVEF 126
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 368 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
WI ++ + E D+ FS++GE+ NI+L D+ TG KG+A + Y+
Sbjct: 39 WI-YIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK 87
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 347 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
P + + LFV + +E+D+++ F +FG+I + D+ TG KG A + Y
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 329 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
DS P+ ++ LF+ + ++ E++++ F+ FGE+ + + L G KG A V
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFV 169
Query: 509 EYE 517
+Y+
Sbjct: 170 KYK 172
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 338 TPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
TP +G LF+ ++ +E + ++ F+ FG I + + +DR T K + V Y+
Sbjct: 419 TPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYD 478
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
+FV NVH +A +++++ FS+FG + ++ + + G KG A V+++T
Sbjct: 685 VFVRNVHFQATDDELKALFSKFGTVTSVR-RVTHKDGKPKGIAFVDFDT 732
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 341 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
P +RS G I F+ N+ + + I + FS FG I + + +D GF KGY V +ET
Sbjct: 112 PAMRRSGAGNI-FIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 347 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
P + + LFV + +E+D+++ F +FG+I + D+ TG KG A + Y
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 329 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
DS P+ ++ LF+ + ++ E++++ F+ FGE+ + + L G KG A V
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFV 169
Query: 509 EYE 517
+Y+
Sbjct: 170 KYK 172
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 338 TPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
TP +G LF+ ++ +E + ++ F+ FG I + + +DR T K + V Y+
Sbjct: 419 TPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYD 478
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 341 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
P +RS G I F+ N+ + + I + FS FG I + + +D GF KGY V +ET
Sbjct: 49 PAMRRSGAGNI-FIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 341 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
P +RS G I F+ N+ + + I + FS FG I + + +D GF KGY V +ET
Sbjct: 112 PAMRRSGAGNI-FIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 338 TPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
T Q + ++V NV ++ +I+ F+ G++ + + D+ TG+ K +A VE++
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.071
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 347 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
P G+ LFV N+ + + + FS+FG I N+ + D T KGYA V
Sbjct: 367 PPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFV 419
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
L ++ + + +E++++ F+ GEI++ L D+ TG GY V Y
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.094
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
L + + + + D++ FS G ++++ + D RTG KG VE+
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
Score = 30.7 bits (66), Expect = 0.66
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 275 SAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKN 454
+ AER NR S+A PG + + V N+H + E+ I++ F FG I+
Sbjct: 100 TCAER-NRAANSSVASTLGFVAPGNKGPTH---VLVENLHPKIDEKMIRDIFESFGRIEK 155
Query: 455 IHLNLDRRTGFLKGYALVEY 514
I L +D +G+A + +
Sbjct: 156 IDLEVDSNRE-NRGFATITF 174
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.5 bits (73), Expect = 0.094
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
L + + + + D++ FS G ++++ + D RTG KG VE+
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
Score = 30.7 bits (66), Expect = 0.66
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 275 SAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKN 454
+ AER NR S+A PG + + V N+H + E+ I++ F FG I+
Sbjct: 245 TCAER-NRAANSSVASTLGFVAPGNKGPTH---VLVENLHPKIDEKMIRDIFESFGRIEK 300
Query: 455 IHLNLDRRTGFLKGYALVEY 514
I L +D +G+A + +
Sbjct: 301 IDLEVDSNRE-NRGFATITF 319
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/94 (28%), Positives = 44/94 (46%)
Frame = +2
Query: 239 KGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDI 418
+G G+ GGG G R RY + + E Q + + ++V N+ E++I
Sbjct: 218 RGGDRGDRRGGGG----GGRDRYHNQS-EKTYDEIFNQAAADNTSVYVGNI-ANLGEDEI 271
Query: 419 QNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
+ F FG I + RT ++GYA V++ET
Sbjct: 272 RRAFDRFGPINEV------RTFKIQGYAFVKFET 299
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+FV ++ E ++ F +FGE+ + D T KGY V Y
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 161 ENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLA 319
+ E +E +EDG+ K+K +K+K + N+ G +++G +GR + L+
Sbjct: 534 QERENYEENEDGDDYSEEKKQKKKKKKSKK-NNKRKGKKKSKKGKKGRKNHLS 585
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+F+ + E+ ++ FG +K LN+D + G KGYA EY
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEY 338
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 320 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 499
P SG GP+R L VSN+ ++ D++ F +FG + ++ + + R KG+
Sbjct: 143 PSTSSGPDGPKR------LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGS--KGF 194
Query: 500 ALVEYE 517
V E
Sbjct: 195 GFVTME 200
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 341 PGPQRS----VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
PG Q+S + +FV ++ E + ++ F FG++ + + D T KGY V
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 509 EY 514
Y
Sbjct: 69 SY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 341 PGPQRS----VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
PG Q+S + +FV ++ E + ++ F FG++ + + D T KGY V
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 509 EY 514
Y
Sbjct: 79 SY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 341 PGPQRS----VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
PG Q+S + +FV ++ E + ++ F FG++ + + D T KGY V
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 509 EY 514
Y
Sbjct: 182 SY 183
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 341 PGPQRS----VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
PG Q+S + +FV ++ E + ++ F FG++ + + D T KGY V
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 509 EY 514
Y
Sbjct: 150 SY 151
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLA-PEGDSGTPGPQRSVEGWI-LFVSNVHEEAQEEDIQNQ 427
G+ +GGG G ++ A E P++ G LFV N+ E +E +++
Sbjct: 76 GHRSGGGGGRSGGGGTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKEL 135
Query: 428 FSEFGEIKNIHLN 466
FS G+I +L+
Sbjct: 136 FSPHGDIAECYLS 148
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLA-PEGDSGTPGPQRSVEGWI-LFVSNVHEEAQEEDIQNQ 427
G+ +GGG G ++ A E P++ G LFV N+ E +E +++
Sbjct: 76 GHRSGGGGGRSGGGGTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKEL 135
Query: 428 FSEFGEIKNIHLN 466
FS G+I +L+
Sbjct: 136 FSPHGDIAECYLS 148
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLA-PEGDSGTPGPQRSVEGWI-LFVSNVHEEAQEEDIQNQ 427
G+ +GGG G ++ A E P++ G LFV N+ E +E +++
Sbjct: 76 GHRSGGGGGRSGGGGTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKEL 135
Query: 428 FSEFGEIKNIHLN 466
FS G+I +L+
Sbjct: 136 FSPHGDIAECYLS 148
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 320 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 499
P SG GP+R L VSN+ ++ D++ F +FG + ++ + + R KG+
Sbjct: 143 PSTSSGPDGPKR------LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGS--KGF 194
Query: 500 ALVEYE 517
V E
Sbjct: 195 GFVTME 200
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+F+ + E+ ++ FG +K LN+D + G KGYA EY
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+F+ + E+ ++ FG +K LN+D + G KGYA EY
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+F+ + E+ ++ FG +K LN+D + G KGYA EY
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEY 316
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
L+V N+ +E+ + F G+++ + + LDR G+ VEY T
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYT 87
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
+FV ++ ++ E +++ F++FGE+ + D +T KGY V +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 371 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYET 520
ILF SN+ E + E IQ FS+F ++ + R K +A +EYE+
Sbjct: 144 ILFCSNIPEGTEPEQIQTIFSQFPGLREV-----RWMPNTKDFAFIEYES 188
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 407 EEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
E+++ F +FG + I + +RRTG KG+A V ++
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFD 81
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEYE 517
L+V E+ E+ + F FG++ I + +D +G +G+ VE++
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 30.7 bits (66), Expect = 0.66
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
L + N+ + D++ F +G+I ++H+ D+ + KG+ V +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 30.7 bits (66), Expect = 0.66
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
L + N+ + D++ F +G+I ++H+ D+ + KG+ V +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
GN G+ A+ G RG P GD+G+PG
Sbjct: 152 GNNGQPGAPAQSGGRGPPGPRGPAGDAGSPG 182
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
GN G+ A+ G RG P GD+G+PG
Sbjct: 152 GNNGQPGAPAQSGGRGPPGPRGPAGDAGSPG 182
>AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical
protein ZK285.2 protein.
Length = 158
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +2
Query: 191 DGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGT 340
DG+ + + K G G G GGG A G G G SG+
Sbjct: 63 DGKNDFSSSRRKRDSSSGSGEGKSGGGGGAGGAGGAGGAGGAGGSGGSGS 112
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +2
Query: 194 GEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV 361
GE G K R RG G G+ G G L P G +G PGP ++
Sbjct: 157 GEMGPPGAPGKIGPRGQRG--QSGGAGTPGNNGAPGHNGELGPCGQAGPPGPAGAI 210
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 463
++VS+VH + E D+++ F FGEI L
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQL 238
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 463
++VS+VH + E D+++ F FGEI L
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQL 238
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 463
++VS+VH + E D+++ F FGEI L
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQL 238
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Frame = +2
Query: 146 DVLDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNE-------AGGGSAAERGNRGR 304
D LD E EE V G G K K GFG+ A GGS + G RG+
Sbjct: 152 DGLDGEQGEEGPVGPSGPPGRRGRKGADGKSAMGGFGSPGPKGVPGAKGGSGLQ-GPRGK 210
Query: 305 YDSL-APEGDSGTPGP 349
+ + P G G PGP
Sbjct: 211 RNYIYGPPGPMGQPGP 226
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
G + G +GN GR AP+G++G PG
Sbjct: 167 GPDGRPGQPGRKGNNGRPGQPAPQGNAGHPG 197
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 236 RKG-RGFGNEAG-GGSAAERGNRGRYDSLAPEGDSGTPGP 349
RKG RG + G GG + GNRG G G PGP
Sbjct: 239 RKGERGQDGQPGPGGRPGQPGNRGSDGHPGTPGGRGLPGP 278
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
G E G+A G RG PEG G PGP
Sbjct: 229 GEEGPPGAAGLDGERGDEGEPGPEGPPGIPGP 260
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 248 GFGNEAGG-GSAAERGNRGRYDSLAPEGDSGTPGPQ 352
G+G E G G+ E G++GR S G G PGPQ
Sbjct: 178 GYGGEPGAPGNNGEPGDKGRDGS---HGTKGAPGPQ 210
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 185 DEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSG 337
DE G + R KE KR+ R FG+ + A G G Y + G G
Sbjct: 66 DEFGRFEVVRGKESRVKRRARAFGSGSYAAGGAGGGGGGGYATGGGGGGGG 116
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 305 YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSE 436
+ S S +P PQRS EG + +S+V E +++D + + E
Sbjct: 254 FPSSVASSASSSPAPQRSSEGILDDLSDVESENEDDDKKEEEKE 297
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGW 370
G G G RG+ + P+GDSG PG Q+ G+
Sbjct: 203 GKLGEAGPNGRDGTRGQKGPIGPKGDSGPPG-QKGPSGY 240
>Z81104-2|CAB70254.1| 233|Caenorhabditis elegans Hypothetical
protein M199.4 protein.
Length = 233
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 284 ERGNRGRYDSLAPEGDSGTPGPQRSVEGW 370
ERG RGR P G G PGP + W
Sbjct: 30 ERGPRGREGREGPRGAQGAPGPNGTGFFW 58
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 28.7 bits (61), Expect = 2.7
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +2
Query: 155 DIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNR----GRYDSLAP 322
D+ + E++ D D + G A LK RKGR + AGGG++ + G LA
Sbjct: 256 DLTSEEQYISDMDAKTG-ASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGSSELAN 314
Query: 323 EGD-SGTPGPQRSVEGWILFVSNVHEEAQEED 415
G+ SG P ++ E +S + E A D
Sbjct: 315 YGEYSGDPSEAQTYEYAKTILSVMTEGAPRPD 346
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
G + G RGN GR P+G++G PG
Sbjct: 168 GPDGRPGQPGRRGNDGRPGQPGPQGNAGQPG 198
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +2
Query: 194 GEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
G G+A K K R G + G+ G G PEGD G PGP
Sbjct: 153 GPPGVAGYKGKRGPR-----GEKGDKGAPGNAGRDGAPGDDGPEGDHGHPGP 199
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 218 KEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
K+K +GRGFG AGGG A G RG G + PG
Sbjct: 451 KKKKPVMRGRGFGG-AGGG-AGNHGQRGGQRGGGQWGGNAGPG 491
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 188 EDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
E GE+G K + KG G+ GS ++G +G + P+GD G G
Sbjct: 152 EKGEKGSPGQKGD-KGEKGEK-GSNGSPGSKGDKGEKGADGNPGPKGDKGADG 202
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +2
Query: 179 EVDEDGEQGIARLKEKARK-----RKG-RGFGNEAGGGSAAERGNRGRYDSLAPEGDSGT 340
EV G+QG A + A K + G RG G+ G E GN G +G++G
Sbjct: 176 EVGAPGDQGGAGNQGAAGKPGLPGKNGQRGSGHPGPTGPVGETGNAGNNGHPGVDGENGK 235
Query: 341 PG 346
PG
Sbjct: 236 PG 237
>AF077539-3|AAC26291.1| 310|Caenorhabditis elegans Hypothetical
protein T25D3.2 protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 320 PEGDSGTPGPQRSVEGWI 373
PEGD G G +R V+GWI
Sbjct: 96 PEGDDGLWGGERVVKGWI 113
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 508
+FV + ++ + F +FG+I+ + DR T +GY V
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFV 81
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 350 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRR 478
Q ++ W L + N+ + ++ED+QN S G+ I L R+
Sbjct: 89 QAKLKEWRLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRK 131
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 218 KEKARKRKGRGFGNEAGGGSAAERGNRGR 304
+ + R R RG G GG+ +RG RGR
Sbjct: 87 RAQQRDRSDRGGGRGGRGGNFGDRGGRGR 115
>U55364-13|AAM29677.1| 250|Caenorhabditis elegans Hypothetical
protein F21C10.3b protein.
Length = 250
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 236 RKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRS-VEGWILFVSNVHEEAQEE 412
R GRG G GG RG RGR + + G S + RS + G F + A
Sbjct: 24 RGGRGGGGRGGG----GRGGRGRSGARSGVGGSRSRPQMRSGIRGSSSFSGGIRSGAHGY 79
Query: 413 DIQNQFSEF 439
+Q + S F
Sbjct: 80 KVQTKTSTF 88
>U55364-12|AAA97977.2| 260|Caenorhabditis elegans Hypothetical
protein F21C10.3a protein.
Length = 260
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 236 RKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRS-VEGWILFVSNVHEEAQEE 412
R GRG G GG RG RGR + + G S + RS + G F + A
Sbjct: 24 RGGRGGGGRGGG----GRGGRGRSGARSGVGGSRSRPQMRSGIRGSSSFSGGIRSGAHGY 79
Query: 413 DIQNQFSEF 439
+Q + S F
Sbjct: 80 KVQTKTSTF 88
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
LF+ + + +E + N FS++G + + + D T +G+ V +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
LF+ + + +E + N FS++G + + + D T +G+ V +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +2
Query: 374 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVEY 514
LF+ + + +E + N FS++G + + + D T +G+ V +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQ 352
G G A RG G+ ++A G +G PGPQ
Sbjct: 186 GPPGSAGRAGPRGQAGQPGTIAIVGLAGRPGPQ 218
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 179 EVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRG 301
++ E+ IA+++++ K G G G +G G +E G G
Sbjct: 691 QISSGKEEWIAQMRQRL-KETGGGIGGASGSGLKSENGTMG 730
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 179 EVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRG 301
++ E+ IA+++++ K G G G +G G +E G G
Sbjct: 691 QISSGKEEWIAQMRQRL-KETGGGIGGASGSGLKSENGTMG 730
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 179 EVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRG 301
++ E+ IA+++++ K G G G +G G +E G G
Sbjct: 691 QISSGKEEWIAQMRQRL-KETGGGIGGASGSGLKSENGTMG 730
>U13019-11|AAC24449.1| 445|Caenorhabditis elegans Hypothetical
protein T12A2.1 protein.
Length = 445
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 365 GWILFVSNVHEEAQEEDIQNQFSEFGE--IKNIHLNLDRRTGF 487
G I+F +N EA E+D++ F E + +++ L+ ++G+
Sbjct: 123 GGIMFTTNKTREASEQDLRKDFEELAKKMLRSGTTTLEAKSGY 165
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 380 VSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 511
+S++ A +ED+Q Q SE + K + ++ ++ + Y+L+E
Sbjct: 2056 LSSIDLLALDEDVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLE 2099
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
GNE G GN+GR + +G G PG
Sbjct: 170 GNEGPTGPRGSPGNKGRDGNPGRDGSPGRPG 200
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 161 ENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGG-GSAAERGNRGRYDSLAPEGDSG 337
+ SE+ DG QGI +K G + G G ++G G +GD+G
Sbjct: 77 DRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMGFPGQKGEGGNSGIPGLKGDTG 136
Query: 338 TPG 346
PG
Sbjct: 137 IPG 139
>U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protein
53 protein.
Length = 160
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 215 LKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGW 370
++E R GR G + GS +RG G+ AP G PG +R +G+
Sbjct: 4 IRECPTGRPGRE-GGDGPKGSKGQRGRTGQQGDSAPPSIRGEPG-ERGDKGF 53
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 161 ENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAA 283
E EE E ++ E G + K +RK+ G+G G + SAA
Sbjct: 28 ETEEEEEQEQGDEAGPSERKRSSRKKGGKG-GKKGSKKSAA 67
>U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical
protein F32E10.1 protein.
Length = 754
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 167 SEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 346
SE+FEVDE EQ + A+K K +G G +E + ++ A DS G
Sbjct: 500 SEDFEVDETSEQ-FLKNASIAQKMKAKGPVEVESEGEESEDNDASDSENEASGSDSEPKG 558
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 161 ENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGG-GSAAERGNRGRYDSLAPEGDSG 337
+ SE+ DG QGI +K G + G G ++G G +GD+G
Sbjct: 77 DRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMGFPGQKGEGGNSGIPGLKGDTG 136
Query: 338 TPG 346
PG
Sbjct: 137 IPG 139
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 161 ENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGG-GSAAERGNRGRYDSLAPEGDSG 337
+ SE+ DG QGI +K G + G G ++G G +GD+G
Sbjct: 77 DRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMGFPGQKGEGGNSGIPGLKGDTG 136
Query: 338 TPG 346
PG
Sbjct: 137 IPG 139
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 251 FGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
+GN G A+ GN G+ P G +G GP
Sbjct: 52 YGNGGYNGPQAQYGNAGQNQPSGPFGGAGYTGP 84
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 254 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
G G GN GR G++GTPGP
Sbjct: 151 GPRGDAGPPGPPGNGGRPGQRGTPGEAGTPGP 182
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 380 VSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 511
+S++ A +ED+Q Q SE + K + ++ ++ + Y+L+E
Sbjct: 2056 LSSIDLLALDEDVQGQVSESHKHKCVQCSIRNQSVYFSSYSLLE 2099
>L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical
protein ZK1236.7 protein.
Length = 324
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +2
Query: 146 DVLDIEN-SEEFEVDED----GEQGIARLKEKARKRKGRGF 253
DV D++ +E+FE DED G++ A+L+ K KR+ R +
Sbjct: 111 DVEDLDGGAEQFEYDEDGKKIGKRKAAKLQAKEEKRQMREY 151
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 152 LDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGD 331
L + + +++ D E R ++ R G G G G A+RG G Y G
Sbjct: 190 LSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 249
Query: 332 SGTPG 346
G G
Sbjct: 250 GGYGG 254
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 161 ENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAA 283
E EE E ++ E G + K +RK+ G+G G + SAA
Sbjct: 28 ETEEEEEQEQGDEAGPSERKRSSRKKGGKG-GKKGSKKSAA 67
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 233 KRKGRGFGNEAGGGSAAER--GNRGRYDSLAPEGDSGTPGP 349
+R GRG GGG ER G+RGR G+SG P
Sbjct: 845 RRGGRGRSGGRGGGRGRERDGGSRGR-GGRGGRGNSGNEPP 884
>AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical
protein Y57G7A.2 protein.
Length = 177
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 287 RGNRGRYDSLAPEG-DSGTPGPQRSVE 364
R NRGRYD + G GT G Q V+
Sbjct: 138 RKNRGRYDPIGAHGAQQGTRGVQNEVQ 164
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 152 LDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGD 331
L + + +++ D E R ++ R G G G G A+RG G Y G
Sbjct: 152 LSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 211
Query: 332 SGTPG 346
G G
Sbjct: 212 GGYGG 216
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 152 LDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGD 331
L + + +++ D E R ++ R G G G G A+RG G Y G
Sbjct: 152 LSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 211
Query: 332 SGTPG 346
G G
Sbjct: 212 GGYGG 216
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 152 LDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGD 331
L + + +++ D E R ++ R G G G G A+RG G Y G
Sbjct: 190 LSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 249
Query: 332 SGTPG 346
G G
Sbjct: 250 GGYGG 254
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +2
Query: 152 LDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGD 331
L + + +++ D E R ++ R G G G G A+RG G Y G
Sbjct: 190 LSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 249
Query: 332 SGTPG 346
G G
Sbjct: 250 GGYGG 254
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 194 GEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQ 352
G QG+A K + G G + G A G +G + P G G GP+
Sbjct: 161 GPQGMAGAKGPQGPKGGNG--DNGPDGKAGANGMQGPPGMMGPPGRQGVSGPK 211
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 188 EDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGD 331
E+ E+ + +R+G G G G G RG RG GD
Sbjct: 311 EEEEKYWTEFNARKNQRQGGGRGGRGGRGGRGGRGGRGGRGGRGGRGD 358
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 245 RGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
+GFGN GG +GN+G + G +G+P P
Sbjct: 102 QGFGNNQQGGFGGNQGNQGGFG-----GRTGSPPP 131
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 245 RGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
+GFGN GG +GN+G + G +G+P P
Sbjct: 123 QGFGNNQQGGFGGNQGNQGGFG-----GRTGSPPP 152
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 245 RGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGP 349
+GFGN GG +GN+G + G +G+P P
Sbjct: 108 QGFGNNQQGGFGGNQGNQGGFG-----GRTGSPPP 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,857,728
Number of Sequences: 27780
Number of extensions: 188294
Number of successful extensions: 1883
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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