Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058459-1|AAL13688.1|  388|Drosophila melanogaster GH26015p pro...    31   0.95 
AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA...    31   0.95 
AE013599-1392|AAF58586.1|  388|Drosophila melanogaster CG8888-PA...    31   0.95 
BT030288-1|ABN49427.1|  306|Drosophila melanogaster IP18558p pro...    29   2.9  
AY071263-1|AAL48885.1|  428|Drosophila melanogaster RE29926p pro...    28   6.7  
AE014134-3327|AAF53953.2|  291|Drosophila melanogaster CG9265-PA...    28   6.7  
AY058434-1|AAL13663.1|  509|Drosophila melanogaster GH21316p pro...    28   8.8  
AE014297-3825|AAX52993.1|  509|Drosophila melanogaster CG4685-PD...    28   8.8  
AE014297-3824|AAX52992.1|  509|Drosophila melanogaster CG4685-PC...    28   8.8  
AE014297-3823|AAX52991.1|  509|Drosophila melanogaster CG4685-PB...    28   8.8  
AE014297-3822|AAF56483.1|  509|Drosophila melanogaster CG4685-PA...    28   8.8  

>AY058459-1|AAL13688.1|  388|Drosophila melanogaster GH26015p
           protein.
          Length = 388

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -3

Query: 519 HNTSQGDQ-RNFWPTYSIHRSVLYGPDYIY*CTNPKLMAYFRNSSDMHP*RRILLTLGRS 343
           + T   DQ +  W   S  +   YG DY Y      +  Y R ++D+ P  R+L+     
Sbjct: 289 NETELRDQAKQMWNQLSSEQKKTYGEDY-YEAAMTSVEKYSRQAADIQPTLRVLIDAVTR 347

Query: 342 HVRHARFRPKSSLDSL 295
               AR+ P +S + L
Sbjct: 348 TFPMARYTPVTSSERL 363


>AE014298-592|AAF45914.1|  402|Drosophila melanogaster CG15376-PA
           protein.
          Length = 402

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 135 ANIGEVVRNL-NNKSTVSAYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPEN 311
           AN+     +L NN  T+  ++ +P   P  G A  + +A   +  L  +  +GG+     
Sbjct: 198 ANLNNYYESLRNNVITLLEHVRLPPPPPPPGAATPSSSASSVVHGLDNVCGAGGQLVAGG 257

Query: 312 SLAGIEHALRVS 347
           SL G EHA   S
Sbjct: 258 SLMGGEHATAYS 269


>AE013599-1392|AAF58586.1|  388|Drosophila melanogaster CG8888-PA
           protein.
          Length = 388

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -3

Query: 519 HNTSQGDQ-RNFWPTYSIHRSVLYGPDYIY*CTNPKLMAYFRNSSDMHP*RRILLTLGRS 343
           + T   DQ +  W   S  +   YG DY Y      +  Y R ++D+ P  R+L+     
Sbjct: 289 NETELRDQAKQMWNQLSSEQKKTYGEDY-YEAAMTSVEKYSRQAADIQPTLRVLIDAVTR 347

Query: 342 HVRHARFRPKSSLDSL 295
               AR+ P +S + L
Sbjct: 348 TFPMARYTPVTSSERL 363


>BT030288-1|ABN49427.1|  306|Drosophila melanogaster IP18558p
           protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
 Frame = +3

Query: 189 YILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTIY 368
           Y L+ FN+     A+     D   C  +T       + PENS A  +  L+  DP S   
Sbjct: 8   YYLITFNNNKFMPAIRVFIEDRMNCCFSTRYDL--TEPPENS-AKAQLPLK-KDPLSGDG 63

Query: 369 VFTDAYPKNYGNMPSVLDLCTNKY----SQVHIILTGVCYMSARNSAGRLDLYY 518
           +F    P+N  +M S  +L  NK+      V  ++ G  Y   R+++G +  ++
Sbjct: 64  LFVLNLPENTSSMSSTANLTRNKHLNDEDDVADVVPGSIYAYPRDASGWMQFWW 117


>AY071263-1|AAL48885.1|  428|Drosophila melanogaster RE29926p
           protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 69  CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFND 212
           CK + V I   E +    ++I+  +G++   +NN   VS   L+   D
Sbjct: 137 CKGYVVDISKKEEVYKAADVIRDEVGDITLLINNAGVVSGLHLLDTPD 184


>AE014134-3327|AAF53953.2|  291|Drosophila melanogaster CG9265-PA
           protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 69  CKSFTVVIDTTESMDDEINIIKANIGEVVRNLNNKSTVSAYILVPFND 212
           CK + V I   E +    ++I+  +G++   +NN   VS   L+   D
Sbjct: 29  CKGYVVDISKKEEVYKAADVIRDEVGDITLLINNAGVVSGLHLLDTPD 76


>AY058434-1|AAL13663.1|  509|Drosophila melanogaster GH21316p
           protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 186 AYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTI 365
           A ++ P+N P    A+ITR A   + +  T+     +D P  +LA  + A+    P+  I
Sbjct: 171 AALITPWNFP---MAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVI 227

Query: 366 YVFT 377
            V T
Sbjct: 228 NVVT 231


>AE014297-3825|AAX52993.1|  509|Drosophila melanogaster CG4685-PD,
           isoform D protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 186 AYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTI 365
           A ++ P+N P    A+ITR A   + +  T+     +D P  +LA  + A+    P+  I
Sbjct: 171 AALITPWNFP---MAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVI 227

Query: 366 YVFT 377
            V T
Sbjct: 228 NVVT 231


>AE014297-3824|AAX52992.1|  509|Drosophila melanogaster CG4685-PC,
           isoform C protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 186 AYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTI 365
           A ++ P+N P    A+ITR A   + +  T+     +D P  +LA  + A+    P+  I
Sbjct: 171 AALITPWNFP---MAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVI 227

Query: 366 YVFT 377
            V T
Sbjct: 228 NVVT 231


>AE014297-3823|AAX52991.1|  509|Drosophila melanogaster CG4685-PB,
           isoform B protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 186 AYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTI 365
           A ++ P+N P    A+ITR A   + +  T+     +D P  +LA  + A+    P+  I
Sbjct: 171 AALITPWNFP---MAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVI 227

Query: 366 YVFT 377
            V T
Sbjct: 228 NVVT 231


>AE014297-3822|AAF56483.1|  509|Drosophila melanogaster CG4685-PA,
           isoform A protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 186 AYILVPFNDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVSDPESTI 365
           A ++ P+N P    A+ITR A   + +  T+     +D P  +LA  + A+    P+  I
Sbjct: 171 AALITPWNFP---MAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVI 227

Query: 366 YVFT 377
            V T
Sbjct: 228 NVVT 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,600,935
Number of Sequences: 53049
Number of extensions: 508229
Number of successful extensions: 1122
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)