Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D02f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U79734-1|AAC51257.1|  914|Homo sapiens huntingtin interacting pr...    30   4.3  
BC110545-1|AAI10546.1| 1037|Homo sapiens huntingtin interacting ...    30   4.3  
AF365404-1|AAL87037.1| 1030|Homo sapiens huntingtin-interacting ...    30   4.3  
AF052288-1|AAC33564.1|  995|Homo sapiens huntingtin interacting ...    30   4.3  
L38559-1|AAA80975.1|  669|Homo sapiens galactocerebrosidase prot...    29   9.9  
L23116-1|AAA16645.1|  669|Homo sapiens galctocerebrosidase protein.    29   9.9  
D86181-1|BAA24902.1|  669|Homo sapiens galactocerebrosidase prot...    29   9.9  
D25284-1|BAA04972.1|  391|Homo sapiens alternative spliced produ...    29   9.9  
D25283-1|BAA04971.1|  669|Homo sapiens galactocerebrosidase prot...    29   9.9  
BC036518-1|AAH36518.1|  669|Homo sapiens GALC protein protein.         29   9.9  

>U79734-1|AAC51257.1|  914|Homo sapiens huntingtin interacting
           protein 1 protein.
          Length = 914

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 142 GDICSLIIMLLRNKGE*HAFEVSFPIVLQIAHRTL 246
           G +CS+ + LLR K E H     FP  LQ++ R L
Sbjct: 13  GQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQL 47


>BC110545-1|AAI10546.1| 1037|Homo sapiens huntingtin interacting
           protein 1 protein.
          Length = 1037

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 142 GDICSLIIMLLRNKGE*HAFEVSFPIVLQIAHRTL 246
           G +CS+ + LLR K E H     FP  LQ++ R L
Sbjct: 136 GQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQL 170


>AF365404-1|AAL87037.1| 1030|Homo sapiens huntingtin-interacting
           protein 1 protein.
          Length = 1030

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 142 GDICSLIIMLLRNKGE*HAFEVSFPIVLQIAHRTL 246
           G +CS+ + LLR K E H     FP  LQ++ R L
Sbjct: 129 GQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQL 163


>AF052288-1|AAC33564.1|  995|Homo sapiens huntingtin interacting
           protein 1 protein.
          Length = 995

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 142 GDICSLIIMLLRNKGE*HAFEVSFPIVLQIAHRTL 246
           G +CS+ + LLR K E H     FP  LQ++ R L
Sbjct: 94  GQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQL 128


>L38559-1|AAA80975.1|  669|Homo sapiens galactocerebrosidase
           protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 353 CWSR*VLKSYKNNYYTIVYFYNIVLSRLTHVNYG 252
           CW R + ++Y N Y T    +N+V S    + YG
Sbjct: 271 CWGRILNQNYINGYMTSTIAWNLVASYYEQLPYG 304


>L23116-1|AAA16645.1|  669|Homo sapiens galctocerebrosidase protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 353 CWSR*VLKSYKNNYYTIVYFYNIVLSRLTHVNYG 252
           CW R + ++Y N Y T    +N+V S    + YG
Sbjct: 271 CWGRILNQNYINGYMTSTIAWNLVASYYEQLPYG 304


>D86181-1|BAA24902.1|  669|Homo sapiens galactocerebrosidase
           protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 353 CWSR*VLKSYKNNYYTIVYFYNIVLSRLTHVNYG 252
           CW R + ++Y N Y T    +N+V S    + YG
Sbjct: 271 CWGRILNQNYINGYMTSTIAWNLVASYYEQLPYG 304


>D25284-1|BAA04972.1|  391|Homo sapiens alternative spliced product
           of galactocerebrosidase protein.
          Length = 391

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 353 CWSR*VLKSYKNNYYTIVYFYNIVLSRLTHVNYG 252
           CW R + ++Y N Y T    +N+V S    + YG
Sbjct: 271 CWGRILNQNYINGYMTSTIAWNLVASYYEQLPYG 304


>D25283-1|BAA04971.1|  669|Homo sapiens galactocerebrosidase
           protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 353 CWSR*VLKSYKNNYYTIVYFYNIVLSRLTHVNYG 252
           CW R + ++Y N Y T    +N+V S    + YG
Sbjct: 271 CWGRILNQNYINGYMTSTIAWNLVASYYEQLPYG 304


>BC036518-1|AAH36518.1|  669|Homo sapiens GALC protein protein.
          Length = 669

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 353 CWSR*VLKSYKNNYYTIVYFYNIVLSRLTHVNYG 252
           CW R + ++Y N Y T    +N+V S    + YG
Sbjct: 271 CWGRILNQNYINGYMTSTIAWNLVASYYEQLPYG 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,139,462
Number of Sequences: 237096
Number of extensions: 1225083
Number of successful extensions: 2541
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)