Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312D01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -3

Query: 246 FTSKEIRDIDGFLSFIVSMPETNGVSSETVETRQI*FISFKHLLSK*IVLIMITALYLLF 67
           FTS  ++ +DG  S + +  E N VS   ++  +   +    LL    V   +   Y++ 
Sbjct: 49  FTSSMVQSLDGNSSDLENSSEENCVSMSNLKKLKF-LLKLGQLLGLAPVKFYVQKFYVVI 107

Query: 66  YIYL 55
             +L
Sbjct: 108 LAFL 111


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 504 DFRVRNPDIKI 472
           DF+  NPDIK+
Sbjct: 745 DFKPNNPDIKV 755


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 228 RDIDGFLSFIVSMPETNGV 172
           + ID  L F+VS+PE   V
Sbjct: 101 KKIDRNLQFVVSLPEVERV 119


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 228 RDIDGFLSFIVSMPETNGV 172
           + ID  L F+VS+PE   V
Sbjct: 101 KKIDRNLQFVVSLPEVERV 119


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 232 FFGCELSRDLMSACPRRSKLEVSSRKGTRC 321
           FF   + +DL  AC       +  R+  RC
Sbjct: 109 FFKRTVRKDLSYACREEKNCIIDKRQRNRC 138


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 260 RSRLSSHPKKYGILTD 213
           R +LS H + YGI  D
Sbjct: 24  RKKLSKHQQIYGIWAD 39


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 99 LIMITALYLLFYIYLTCKT 43
          ++   A++LLFY++   KT
Sbjct: 7  VLTAAAVFLLFYLFYCYKT 25


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 99 LIMITALYLLFYIYLTCKT 43
          ++   A++LLFY++   KT
Sbjct: 7  VLTAAAVFLLFYLFYCYKT 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,741
Number of Sequences: 336
Number of extensions: 2562
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)