Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312C11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 3e-41
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 163 6e-41
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 147 6e-36
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 33 0.11
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 4.1
SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.1
SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 27 7.1
SB_44299| Best HMM Match : IWS1_C (HMM E-Value=3.9) 27 9.4
SB_33836| Best HMM Match : PsbI (HMM E-Value=2) 27 9.4
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 165 bits (401), Expect = 2e-41
Identities = 81/138 (58%), Positives = 107/138 (77%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 258 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 437
WRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY
Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197
Query: 438 LKMKGDYYRYLAEVATGE 491
K+KGDYYRYLAE + G+
Sbjct: 198 FKLKGDYYRYLAEFSHGQ 215
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 164 bits (399), Expect = 3e-41
Identities = 82/122 (67%), Positives = 91/122 (74%)
Frame = +3
Query: 147 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 326
MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 327 YRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSV 506
YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGDYYRY EVA + R V
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGADRRREV 120
Query: 507 VE 512
V+
Sbjct: 121 VQ 122
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 163 bits (397), Expect = 6e-41
Identities = 84/155 (54%), Positives = 107/155 (69%), Gaps = 3/155 (1%)
Frame = +3
Query: 66 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 245
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 246 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---N 416
RRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+ N
Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120
Query: 417 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 521
E+KVFYLKM+GDY+RYL EVA G++R +E S+
Sbjct: 121 TEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEKSR 155
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 147 bits (356), Expect = 6e-36
Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = +3
Query: 87 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 266
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 267 ISSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 437
I+SIEQK E G + K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY
Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122
Query: 438 LKM 446
K+
Sbjct: 123 NKI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 83.0 bits (196), Expect = 1e-16
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 258 WRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 377
WR + ++ R Q+ +Y+ K+E EL+ +C ++L
Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +3
Query: 90 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 269
KE+ AK ++ ER + A K+ E + EE++ L K R+ +
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398
Query: 270 SSIEQKTEGSERKQQMAKEYRVKVEK 347
+ IE+K + E+K+Q +E K E+
Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Frame = +3
Query: 75 TMSVDKEELVQRAKLAEQAERY---DDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVG 242
++S+ +EL + LA Q + D A K+VT ++ + E R + +
Sbjct: 3123 SLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIEMVSCAA 3182
Query: 243 ARRSSWR--------VISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 398
R S++ + SS++++T+ + KQQ + +VE + E V G+ +HL
Sbjct: 3183 CLRKSYQESAFLDLLITSSLQKQTKQIKEKQQAVMKDLAQVEPAVDEARQAVKGIKKQHL 3242
Query: 399 I 401
+
Sbjct: 3243 V 3243
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +3
Query: 66 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLL-SVAYKNVVG 242
PSS S DK+E+ +++ +++++ ++A K + E ++S + S+ K +
Sbjct: 1066 PSSRSSHDKDEISEKSNPSDKSD--VEVARKNKHMPEALYKISETISGMNDSITLKEPLK 1123
Query: 243 ARRSSWR--VISSIEQKTEGSERKQQMAKEYRVKVEKELR 356
A+ R ++ + E +R+ + K++R++ EK+ R
Sbjct: 1124 AKDGDGRNKEEQELKDRMENEKREDTIRKQHRLQWEKKAR 1163
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +3
Query: 90 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR------R 251
++ L + K A +R +A+A+ + + + LS K VV + +
Sbjct: 279 QKTLSEMFKQAVTEDRPKMLASAITKALNQDIHSPSALNLPLSTPAKQVVKTKWDRIREK 338
Query: 252 SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 416
W ++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN
Sbjct: 339 HQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 108 RAKLAEQAERYDDMAAAM-KEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 284
+ K+ +++E+YD + + KE T+ G + E + N AR + ++ +
Sbjct: 13 KRKIFKKSEKYDRLEEPLEKEGTDGGEIEAEAEVEPHTEEEANYNEARSENCEKNNNNDS 72
Query: 285 KTEGSERKQQMAKEYRVKVEKELRE 359
T ++ +Q KE+ V +EK+L++
Sbjct: 73 STPDAKSQQADIKEWIVSLEKQLKD 97
>SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = +3
Query: 57 SSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 236
+ L S+ +D+E R +++++ RY + A MK V E + ++E + +
Sbjct: 537 TGLDSNLSKLDQEVRGLREEISQEESRYHYLHAMMK-VLEIQQKRIDDEMKAYTAQDQ-- 593
Query: 237 VGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 359
R+ SWR EQ T + ++ + K R K +K +RE
Sbjct: 594 -ADRKKSWR-----EQYTRKIQEQENLGKSLREK-QKAVRE 627
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 261 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 365
R++ IE+K E E ++ AKE + + E+E + IC
Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 306 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 407
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 366 YDVLGLLDKHLIPKASNPESKVFYLKMKGDYY 461
YD ++ HL+P A +++ +K+ DYY
Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 135 RYDDMAAAMKEVTETGVELSNEERNLLSV 221
+YD++ AA+K+ T TG+ S + L V
Sbjct: 57 KYDNLLAAVKDATNTGIRESGIDARLCDV 85
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 135 RYDDMAAAMKEVTETGVELSNEERNLLSV 221
+YD++ AA+K+ T TG+ S + L V
Sbjct: 163 KYDNLLAAVKDATNTGIRESGIDARLCDV 191
>SB_44299| Best HMM Match : IWS1_C (HMM E-Value=3.9)
Length = 454
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 198 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVL 377
+ER + +V ++ ARRSS R + +++ TE + + E +V + R I
Sbjct: 310 DERLVAAVVMQSRSEARRSSRRTMQTVQDTTENTLDRNN--NEIKVTKTQPSRRISVSDP 367
Query: 378 GLLDKH-LIPKASNPESKVFYLKMKGDYYR 464
LL + L+ + ++P + K + YR
Sbjct: 368 KLLPRRPLVEETTSPSPNSLIEEAKTNKYR 397
>SB_33836| Best HMM Match : PsbI (HMM E-Value=2)
Length = 241
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 102 VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV-ISSI 278
+ R +L++ Y MAA + E TE E + N+L+ + V A W + +
Sbjct: 152 ISRDQLSQLLLVYVGMAADIMEFTEIIKEDEIRKVNMLN--NNHFVNAVILFWSMSLFQF 209
Query: 279 EQKTEGSERKQQMAKEYRVKVEKELRE 359
G+ER Q ++ + K+E+EL +
Sbjct: 210 TLTISGTERTAQRLEKEKAKIEEELHK 236
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 54 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 206
+S LPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/43 (20%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +3
Query: 270 SSIEQKTEGSERKQQMAKEYRVKVE----KELREICYDVLGLL 386
+S+ +K E ++ + Y++K++ K+++++C+ V+G++
Sbjct: 20 NSLREKVERKTISNRITRNYKMKLQPMEIKDMKKLCFAVIGVI 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,011,700
Number of Sequences: 59808
Number of extensions: 295729
Number of successful extensions: 955
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -