Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312C11f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 177 3e-45
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 173 6e-44
At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical... 172 1e-43
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 171 2e-43
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 171 2e-43
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 171 2e-43
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 168 2e-42
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 167 5e-42
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 166 9e-42
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 164 3e-41
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 164 3e-41
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 163 6e-41
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 163 6e-41
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 161 3e-40
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 160 6e-40
At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar ... 124 5e-29
At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10) s... 101 2e-22
At3g58840.1 68416.m06558 expressed protein 39 0.002
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 31 0.62
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 31 0.62
At5g65685.1 68418.m08268 soluble glycogen synthase-related conta... 30 0.82
At2g42190.1 68415.m05221 expressed protein ; similar to GP|9826|... 30 0.82
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 30 1.1
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 1.9
At1g10880.1 68414.m01250 expressed protein contains Pfam profile... 29 1.9
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 2.5
At5g40840.2 68418.m04959 cohesion family protein SYN2 (SYN2) ide... 29 2.5
At5g40840.1 68418.m04958 cohesion family protein SYN2 (SYN2) ide... 29 2.5
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.5
At5g04980.1 68418.m00527 endonuclease/exonuclease/phosphatase fa... 28 4.4
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 28 4.4
At3g63350.1 68416.m07129 heat shock transcription factor family ... 28 4.4
At3g51910.1 68416.m05694 heat shock transcription factor family ... 28 4.4
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 4.4
At2g05590.2 68415.m00595 expressed protein similar to nucleolar ... 28 4.4
At2g05590.1 68415.m00594 expressed protein similar to nucleolar ... 28 4.4
At5g19750.1 68418.m02348 peroxisomal membrane 22 kDa family prot... 27 5.8
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 27 5.8
At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containi... 27 7.7
At2g40090.1 68415.m04927 ABC1 family protein contains Pfam domai... 27 7.7
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 27 7.7
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 27 7.7
At1g18180.1 68414.m02260 expressed protein 27 7.7
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 177 bits (432), Expect = 3e-45
Identities = 85/147 (57%), Positives = 110/147 (74%), Gaps = 2/147 (1%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M ++ + V AKL EQAERYD+M AMK+V VEL+ EERNLLSV YKNV+GARR+S
Sbjct: 1 MENERAKQVYLAKLNEQAERYDEMVEAMKKVAALDVELTIEERNLLSVGYKNVIGARRAS 60
Query: 258 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 431
WR++SSIEQK E G+E+ + K+YR KVE+EL +ICYD+L ++DKHL+P A++ ES V
Sbjct: 61 WRILSSIEQKEESKGNEQNAKRIKDYRTKVEEELSKICYDILAVIDKHLVPFATSGESTV 120
Query: 432 FYLKMKGDYYRYLAEVATGETRHSVVE 512
FY KMKGDY+RYLAE +G R +
Sbjct: 121 FYYKMKGDYFRYLAEFKSGADREEAAD 147
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 173 bits (421), Expect = 6e-44
Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
Frame = +3
Query: 63 LPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 242
+ SS ++E V AKL+EQAERYD+M MK+V EL+ EERNLLSV YKNV+G
Sbjct: 1 MSSSGSDKERETFVYMAKLSEQAERYDEMVETMKKVARVNSELTVEERNLLSVGYKNVIG 60
Query: 243 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 416
ARR+SWR++SSIEQK E G+E + K YR KVE EL IC D+L ++D+HLIP A++
Sbjct: 61 ARRASWRIMSSIEQKEESKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATS 120
Query: 417 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDS 518
E+ VFY KMKGDYYRYLAE T + R E S
Sbjct: 121 GEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQS 154
>At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical to
14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis
thaliana]
Length = 265
Score = 172 bits (418), Expect = 1e-43
Identities = 90/151 (59%), Positives = 110/151 (72%), Gaps = 4/151 (2%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARR 251
MS +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR
Sbjct: 1 MSSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARR 60
Query: 252 SSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 425
+SWR+ISSIEQK E G++ + K+YR K+E EL +IC +L LLD HL+P AS ES
Sbjct: 61 ASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAES 120
Query: 426 KVFYLKMKGDYYRYLAEVATGETRHSVVEDS 518
KVFYLKMKGDY+RYLAE TG R E +
Sbjct: 121 KVFYLKMKGDYHRYLAEFKTGAERKEAAEST 151
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 171 bits (416), Expect = 2e-43
Identities = 81/149 (54%), Positives = 109/149 (73%), Gaps = 2/149 (1%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M ++E+ V AKL+EQ ERYD+M AMK+V + VEL+ EERNL+SV YKNV+GARR+S
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRAS 60
Query: 258 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 431
WR++SSIEQK E G++ + K YR +VE EL ++C D+L ++DKHLIP ++ ES V
Sbjct: 61 WRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTV 120
Query: 432 FYLKMKGDYYRYLAEVATGETRHSVVEDS 518
F+ KMKGDYYRYLAE ++G R + S
Sbjct: 121 FFYKMKGDYYRYLAEFSSGAERKEAADQS 149
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 171 bits (416), Expect = 2e-43
Identities = 81/149 (54%), Positives = 109/149 (73%), Gaps = 2/149 (1%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M ++E+ V AKL+EQ ERYD+M AMK+V + VEL+ EERNL+SV YKNV+GARR+S
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRAS 60
Query: 258 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 431
WR++SSIEQK E G++ + K YR +VE EL ++C D+L ++DKHLIP ++ ES V
Sbjct: 61 WRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTV 120
Query: 432 FYLKMKGDYYRYLAEVATGETRHSVVEDS 518
F+ KMKGDYYRYLAE ++G R + S
Sbjct: 121 FFYKMKGDYYRYLAEFSSGAERKEAADQS 149
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 171 bits (416), Expect = 2e-43
Identities = 81/149 (54%), Positives = 109/149 (73%), Gaps = 2/149 (1%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M ++E+ V AKL+EQ ERYD+M AMK+V + VEL+ EERNL+SV YKNV+GARR+S
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRAS 60
Query: 258 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 431
WR++SSIEQK E G++ + K YR +VE EL ++C D+L ++DKHLIP ++ ES V
Sbjct: 61 WRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTV 120
Query: 432 FYLKMKGDYYRYLAEVATGETRHSVVEDS 518
F+ KMKGDYYRYLAE ++G R + S
Sbjct: 121 FFYKMKGDYYRYLAEFSSGAERKEAADQS 149
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 168 bits (408), Expect = 2e-42
Identities = 88/147 (59%), Positives = 107/147 (72%), Gaps = 4/147 (2%)
Frame = +3
Query: 90 KEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSSWR 263
+EE V AKLAEQAERY++M M++V +T ELS EERNLLSVAYKNV+GARR+SWR
Sbjct: 4 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWR 63
Query: 264 VISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 437
+ISSIEQK E G+E + K+YR K+E EL +IC +L +L+ HLIP AS ESKVFY
Sbjct: 64 IISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFY 123
Query: 438 LKMKGDYYRYLAEVATGETRHSVVEDS 518
LKMKGDY+RYLAE G R E +
Sbjct: 124 LKMKGDYHRYLAEFKAGAERKEAAEST 150
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 167 bits (405), Expect = 5e-42
Identities = 87/149 (58%), Positives = 108/149 (72%), Gaps = 4/149 (2%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARR 251
M+ +EE V AKLAEQAERY++M M++V+ G EL+ EERNLLSVAYKNV+GARR
Sbjct: 1 MASGREEFVYMAKLAEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARR 60
Query: 252 SSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 425
+SWR+ISSIEQK E G++ +EYR K+E EL IC +L LLD LIP A++ +S
Sbjct: 61 ASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDS 120
Query: 426 KVFYLKMKGDYYRYLAEVATGETRHSVVE 512
KVFYLKMKGDY+RYLAE TG+ R E
Sbjct: 121 KVFYLKMKGDYHRYLAEFKTGQERKDAAE 149
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 166 bits (403), Expect = 9e-42
Identities = 87/147 (59%), Positives = 107/147 (72%), Gaps = 4/147 (2%)
Frame = +3
Query: 90 KEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWR 263
+EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 7 REENVYLAKLAEQAERYEEMVEFMEKVAKTVETEELTVEERNLLSVAYKNVIGARRASWR 66
Query: 264 VISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 437
+ISSIEQK + G+ + K+YR K+E EL +IC +L LL+ HLIP AS ESKVFY
Sbjct: 67 IISSIEQKEDSRGNSDHVSIIKDYRGKIETELSKICDGILNLLEAHLIPAASLAESKVFY 126
Query: 438 LKMKGDYYRYLAEVATGETRHSVVEDS 518
LKMKGDY+RYLAE TG R E +
Sbjct: 127 LKMKGDYHRYLAEFKTGAERKEAAEST 153
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 164 bits (399), Expect = 3e-41
Identities = 79/146 (54%), Positives = 104/146 (71%), Gaps = 2/146 (1%)
Frame = +3
Query: 87 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 266
+++ V AKL+EQAERY++M +MK V + V+L+ EERNLLSV YKNV+G+RR+SWR+
Sbjct: 6 ERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEERNLLSVGYKNVIGSRRASWRI 65
Query: 267 ISSIEQK--TEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYL 440
SSIEQK +G++ + KEY KVE EL IC D++ +LD+HLIP AS ES VF+
Sbjct: 66 FSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFN 125
Query: 441 KMKGDYYRYLAEVATGETRHSVVEDS 518
KMKGDYYRYLAE +G R + S
Sbjct: 126 KMKGDYYRYLAEFKSGNERKEAADQS 151
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 164 bits (399), Expect = 3e-41
Identities = 84/145 (57%), Positives = 106/145 (73%), Gaps = 4/145 (2%)
Frame = +3
Query: 90 KEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWR 263
+EE V AKLAEQAERY++M M++V E EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 11 REEFVYLAKLAEQAERYEEMVEFMEKVAEAVDKDELTVEERNLLSVAYKNVIGARRASWR 70
Query: 264 VISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 437
+ISSIEQK E G++ ++YR K+E EL +IC +L LLD L+P ++N +SKVFY
Sbjct: 71 IISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFY 130
Query: 438 LKMKGDYYRYLAEVATGETRHSVVE 512
LKMKGDY+RYLAE TG+ R E
Sbjct: 131 LKMKGDYHRYLAEFKTGQERKDAAE 155
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 163 bits (396), Expect = 6e-41
Identities = 80/151 (52%), Positives = 110/151 (72%), Gaps = 5/151 (3%)
Frame = +3
Query: 81 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV---ELSNEERNLLSVAYKNVVGARR 251
++ +++ V AKLAEQAERY++M M+++ EL+ EERNLLSVAYKNV+G+ R
Sbjct: 4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLR 63
Query: 252 SSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 425
++WR++SSIEQK E + ++ ++ K+YR KVE EL IC +L LLD HLIP A+ ES
Sbjct: 64 AAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASES 123
Query: 426 KVFYLKMKGDYYRYLAEVATGETRHSVVEDS 518
KVFYLKMKGDY+RYLAE +G+ R + ED+
Sbjct: 124 KVFYLKMKGDYHRYLAEFKSGDERKTAAEDT 154
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 163 bits (396), Expect = 6e-41
Identities = 80/151 (52%), Positives = 110/151 (72%), Gaps = 5/151 (3%)
Frame = +3
Query: 81 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV---ELSNEERNLLSVAYKNVVGARR 251
++ +++ V AKLAEQAERY++M M+++ EL+ EERNLLSVAYKNV+G+ R
Sbjct: 4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLR 63
Query: 252 SSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIPKASNPES 425
++WR++SSIEQK E + ++ ++ K+YR KVE EL IC +L LLD HLIP A+ ES
Sbjct: 64 AAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASES 123
Query: 426 KVFYLKMKGDYYRYLAEVATGETRHSVVEDS 518
KVFYLKMKGDY+RYLAE +G+ R + ED+
Sbjct: 124 KVFYLKMKGDYHRYLAEFKSGDERKTAAEDT 154
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 161 bits (390), Expect = 3e-40
Identities = 80/152 (52%), Positives = 110/152 (72%), Gaps = 6/152 (3%)
Frame = +3
Query: 81 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV----ELSNEERNLLSVAYKNVVGAR 248
++ +++ V AKLAEQAERY++M M+++ TG EL+ EERNLLSVAYKNV+G+
Sbjct: 4 TLGRDQYVYMAKLAEQAERYEEMVQFMEQLV-TGATPAEELTVEERNLLSVAYKNVIGSL 62
Query: 249 RSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIPKASNPE 422
R++WR++SSIEQK E + + ++ K+YR KVE EL +C +L LLD HLIP A E
Sbjct: 63 RAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASE 122
Query: 423 SKVFYLKMKGDYYRYLAEVATGETRHSVVEDS 518
SKVFYLKMKGDY+RY+AE +G+ R + ED+
Sbjct: 123 SKVFYLKMKGDYHRYMAEFKSGDERKTAAEDT 154
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 160 bits (388), Expect = 6e-40
Identities = 81/145 (55%), Positives = 107/145 (73%), Gaps = 4/145 (2%)
Frame = +3
Query: 90 KEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWR 263
++E V AKLAEQAERY++M M++V + EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 10 RDEFVYMAKLAEQAERYEEMVEFMEKVAKAVDKDELTVEERNLLSVAYKNVIGARRASWR 69
Query: 264 VISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 437
+ISSIEQK E G++ + ++YR K+E EL +IC +L LLD L+P A++ +SKVFY
Sbjct: 70 IISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFY 129
Query: 438 LKMKGDYYRYLAEVATGETRHSVVE 512
LKMKGDY+RYLAE +G+ R E
Sbjct: 130 LKMKGDYHRYLAEFKSGQERKDAAE 154
>At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar to
GF14 epsilon isoform GI:1022778 from [Arabidopsis
thaliana]; contains Pfam profile: PF00244 14-3-3
proteins
Length = 245
Score = 124 bits (298), Expect = 5e-29
Identities = 64/150 (42%), Positives = 99/150 (66%), Gaps = 3/150 (2%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 257
M ++E+L+ AKL QA RYDD+ +M++V E +ELS EER+LL+ YKNV+ A+R S
Sbjct: 1 MENEREKLIYLAKLGCQAGRYDDVMKSMRKVCELDIELSEEERDLLTTGYKNVMEAKRVS 60
Query: 258 WRVISSIE--QKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK-ASNPESK 428
RVISSIE + ++G+++ ++ K + V+ E +C D+L L+D HLIP +N ES
Sbjct: 61 LRVISSIEKMEDSKGNDQNVKLIKGQQEMVKYEFFNVCNDILSLIDSHLIPSTTTNVESI 120
Query: 429 VFYLKMKGDYYRYLAEVATGETRHSVVEDS 518
V + ++KGDY+RY+AE + R ++S
Sbjct: 121 VLFNRVKGDYFRYMAEFGSDAERKENADNS 150
>At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10)
similar to 14-3-3 protein GF14 epsilon GI:5802798 from
[Arabidopsis thaliana]
Length = 196
Score = 101 bits (243), Expect = 2e-22
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Frame = +3
Query: 78 MSVDKEELVQRAKLAEQAERY----DDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 245
M ++ V A L+ +ERY +++ AMK+ + ELS +ERNL+SV YKNV+ A
Sbjct: 1 MENEQSTHVHFASLSSSSERYNETFEEIKKAMKKSVQLKAELSAKERNLVSVGYKNVISA 60
Query: 246 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 419
RR+S ++SSI QK E G+E + K YR KVE EL +IC D+L +++K LIP ++
Sbjct: 61 RRASLEILSSIVQKEESKGNEENVKKLKNYRNKVEDELAKICNDILSVINKQLIPSSTTV 120
Query: 420 ESKVFYLKMKGDY 458
+S V + M D+
Sbjct: 121 DSSVLFYNMLADF 133
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Frame = +3
Query: 96 ELVQR-AKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV-- 266
E+ QR ++ ++ E Y++ A++ ++ VEL E NL ++ G +++ V
Sbjct: 66 EMNQRFGEMEKEIEEYEEEKKALEAISTRAVELETEVSNLHDDLITSLNGVDKTAEEVAE 125
Query: 267 ----ISSIEQKTEGSERKQQMAKEYRVKVEKELREI 362
++ I +K EG E++ + ++ R +VEK +R++
Sbjct: 126 LKKALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDL 161
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/103 (21%), Positives = 47/103 (45%)
Frame = +3
Query: 54 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN 233
++S+ + V+ + +KLAE + ++ +KEV ET + +ER + ++
Sbjct: 195 VASVNGRSSDVENKIYSAESKLAEATRKSSELKLRLKEV-ETRESVLQQERLSFTKERES 253
Query: 234 VVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 362
G + ++ E+K +G E K + E+++ EI
Sbjct: 254 YEGTFQKQREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEI 296
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/103 (21%), Positives = 47/103 (45%)
Frame = +3
Query: 54 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN 233
++S+ + V+ + +KLAE + ++ +KEV ET + +ER + ++
Sbjct: 208 VASVNGRSSDVENKIYSAESKLAEATRKSSELKLRLKEV-ETRESVLQQERLSFTKERES 266
Query: 234 VVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 362
G + ++ E+K +G E K + E+++ EI
Sbjct: 267 YEGTFQKQREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEI 309
>At5g65685.1 68418.m08268 soluble glycogen synthase-related contains
weak similarity to Soluble glycogen synthase,
chloroplast precursor (EC 2.4.1.11) (SS III)
(Swiss-Prot:Q43846) [Solanum tuberosum]
Length = 460
Score = 30.3 bits (65), Expect = 0.82
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +3
Query: 120 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ----K 287
+E E +D+ ++ + + T + NL A KN++ + + +EQ K
Sbjct: 40 SEGHEEFDNSQKSLGQSSITKEAKHKDIWNLFREAQKNIMILNKQRLAAVDELEQLKKDK 99
Query: 288 TEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPE 422
E ER Q+ E ++ ++K+ + +++L +D +I N E
Sbjct: 100 EELLERINQLEAESQIVIKKDKSSLFWELLLRIDSMVINGLVNIE 144
>At2g42190.1 68415.m05221 expressed protein ; similar to
GP|9826|X07453
Length = 141
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +3
Query: 87 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS--W 260
D EE+V++ ++ ++ E DD + K++ E ++SN L+ +N +G++ ++
Sbjct: 51 DDEEMVEKMEVEDEDEEIDDGSVTSKDLKERKRKMSNGSNTDLT-EEENGLGSKPNTDDS 109
Query: 261 RVISSIEQKTEGSERKQQMAKEYRVKVE 344
+SI + GS RK + + VE
Sbjct: 110 TRSTSIGFRQNGSRRKSKPRRAAEAVVE 137
>At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC)
family protein similar to SMC1 protein [Bos taurus]
GI:4235253, 14S cohesin SMC1 subunit (SMC protein)
[Xenopus laevis] GI:3328231; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.9 bits (64), Expect = 1.1
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
Frame = +3
Query: 147 MAAAMKEVTETGVELSNEERNL---LSVAYKNVVGAR-RSSWRVISSIEQKTEGSERKQQ 314
+ A KE E +ELSN+ L L VG+R R ISS+E EG ++
Sbjct: 823 LKTAEKEAEER-LELSNQLAKLKYQLEYEQNRDVGSRIRKIESSISSLETDLEGIQKTMS 881
Query: 315 MAKEYRVKVEKELR--------EICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYL 470
KE VK+ E+ IC + L D ++ A + Y K D+ +
Sbjct: 882 ERKETAVKITNEINNWKKEMEARICTGIFFLRDYLMLLLAECKQKSEEYEKEILDWKKQA 941
Query: 471 AEVATGETR 497
++ T T+
Sbjct: 942 SQATTSITK 950
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 509 YNRMSGFSCGHFCKVPVVISFHFEVKHF 426
+N+++GF FCK+P + SF F F
Sbjct: 306 HNKLTGFVVDKFCKLPNLDSFKFSYNFF 333
>At1g10880.1 68414.m01250 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 651
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 216 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICY 368
+V + ++VG++R+ + SIE+ + QQ ++++KE+RE Y
Sbjct: 371 NVGHHDIVGSKRNQYHYAKSIEENENMVKEMQQQ----MLQIDKEIREKTY 417
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.7 bits (61), Expect = 2.5
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Frame = +3
Query: 93 EELVQRAKLAEQAERYDD----MAAAMKEVTETGVELSNEERNLLSV-------AYKNVV 239
EELV+ AK EQA + + +A A ++ ELS + + +S A K +
Sbjct: 481 EELVETAKKLEQATKEAEDAKALATASRDELRMAKELSEQAKRGMSTIESRLVEAKKEME 540
Query: 240 GARRSSWRVISSIE--QKTEGSERKQQM 317
AR S +++I+ Q+TE S+R +++
Sbjct: 541 AARASEKLALAAIKALQETESSQRFEEI 568
>At5g40840.2 68418.m04959 cohesion family protein SYN2 (SYN2)
identical to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; supporting cDNA
gi|12006359|gb|AF281154.1|AF281154
Length = 810
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 276 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP-KASNPESKVFYLKM 446
+EQ+ E K + + R + +KE + Y+ L L K + K ++P S VF +++
Sbjct: 746 LEQREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMRV 803
>At5g40840.1 68418.m04958 cohesion family protein SYN2 (SYN2)
identical to cohesion family protein SYN2 [Arabidopsis
thaliana] GI:12006360; supporting cDNA
gi|12006359|gb|AF281154.1|AF281154
Length = 809
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 276 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP-KASNPESKVFYLKM 446
+EQ+ E K + + R + +KE + Y+ L L K + K ++P S VF +++
Sbjct: 745 LEQREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMRV 802
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 28.7 bits (61), Expect = 2.5
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +3
Query: 57 SSLPSSTMSVD--KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 230
+ L SS V+ KE + K E+ ++ + +T V+ NEE AY+
Sbjct: 737 TKLQSSIQEVEVLKEREAENIKQIEELSLSNERLVEKEAKLQTVVQ-ENEELREKESAYQ 795
Query: 231 NVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 392
+ + + E K + S ++ + +E V K++ E+ LLDK
Sbjct: 796 KKIEELSKVDEIFADREAKLQSSTQENEELREREVAYLKKIEELAKLQENLLDK 849
>At5g04980.1 68418.m00527 endonuclease/exonuclease/phosphatase
family protein contains similarity to inositol
polyphosphate 5-phosphatase I (GI:10444261) and II
(GI:10444263) [Arabidopsis thaliana]; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 437
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 142 SYRSACSANLARCTSSSLSTDIVDD-GRELIH*CP 41
S+R+ C L C S+ S DIV GRE CP
Sbjct: 113 SFRTECRRKLKICNCSTFSEDIVRKYGRESCFRCP 147
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 27.9 bits (59), Expect = 4.4
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +3
Query: 75 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 254
T+++ EE + +K A +AE + A V+E G E+R+L + N R
Sbjct: 628 TVTLTIEEYYELSKRAHEAEEAANARVAAA-VSEVGEAKETEKRSLEKLEEVNKEMVERK 686
Query: 255 SWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 359
+ G+ K + AKE ++ VE+ELR+
Sbjct: 687 A---------TLAGAMEKAEKAKEGKLGVEQELRK 712
>At3g63350.1 68416.m07129 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 282
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 165 EVTETGVELSN--EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQ 314
E + GVEL EER++L + + + + + ++EQ+ G+E+KQ+
Sbjct: 135 EAHDPGVELPQLREERHVLMMEISTLRQEEQRARGYVQAMEQRINGAEKKQR 186
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/114 (19%), Positives = 53/114 (46%)
Frame = +3
Query: 87 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 266
++E L+ + +L + +R + + + EL E+ +L + ++ ++++
Sbjct: 102 NEEFLLGQRQLLKNIKRRNPFTPSSSPSHDACNEL-RREKQVLMMEIVSLRQQQQTTKSY 160
Query: 267 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 428
I ++EQ+ EG+ERKQ+ + + + + +L DK + N +K
Sbjct: 161 IKAMEQRIEGTERKQRQMMSFLARA-MQSPSFLHQLLKQRDKKIKELEDNESAK 213
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 509 YNRMSGFSCGHFCKVPVVISFHFEVKHF 426
YN+ +GF + CK+P + +F F F
Sbjct: 319 YNKFTGFVTDNICKLPKLSNFTFSYNFF 346
>At2g05590.2 68415.m00595 expressed protein similar to nucleolar
protein C7C (GI:13540302) [Rattus norvegicus]
Length = 303
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 DKE-ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 263
DK+ EL AK+ E Y D M+E+TE+ V ++ L + N+V R W
Sbjct: 100 DKDCELRVSAKVEESGNDYFDGVKKMRELTESSVFITANLFEFLHASLPNIV--RGCKWI 157
Query: 264 VISS 275
++ S
Sbjct: 158 LLYS 161
>At2g05590.1 68415.m00594 expressed protein similar to nucleolar
protein C7C (GI:13540302) [Rattus norvegicus]
Length = 263
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 DKE-ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 263
DK+ EL AK+ E Y D M+E+TE+ V ++ L + N+V R W
Sbjct: 100 DKDCELRVSAKVEESGNDYFDGVKKMRELTESSVFITANLFEFLHASLPNIV--RGCKWI 157
Query: 264 VISS 275
++ S
Sbjct: 158 LLYS 161
>At5g19750.1 68418.m02348 peroxisomal membrane 22 kDa family protein
similar to SP|P42925 22 kDa peroxisomal membrane protein
{Mus musculus}; contains Pfam profile PF04117: Mpv17 /
PMP22 family
Length = 288
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 184 SNLATRRGTSFQLLIRMS*VPDGHHGVS 267
SN R GT+F L+R+S VP G+ G S
Sbjct: 57 SNWPGRSGTAFGHLVRVSAVPGGNSGGS 84
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/81 (23%), Positives = 33/81 (40%)
Frame = +3
Query: 114 KLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE 293
KLA Q DD A + + + + E + + K + R ISS+E++
Sbjct: 497 KLANQGSETDDFQAKLSVLEAEKYQQAKELQITIEDLTKQLTSERERLRSQISSLEEEKN 556
Query: 294 GSERKQQMAKEYRVKVEKELR 356
Q K VK++ +L+
Sbjct: 557 QVNEIYQSTKNELVKLQAQLQ 577
>At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 778
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 279 EQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKG 452
+ + G + ++++E V V K+L D G + L+PK P+S+++ MKG
Sbjct: 368 DDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSG--EPPLLPKVFAPDSRIYTTLMKG 423
>At2g40090.1 68415.m04927 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 538
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 225 YKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 392
Y+N V A ++ S+ EGS + ++ E ++ ++L+E+C+ G+ K
Sbjct: 50 YRNTVTAASIAFDYEYSLLGLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIK 105
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 27.1 bits (57), Expect = 7.7
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 90 KEELV-QRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 266
+EELV ++ KL + ER D +A+ EV+ + S++ LLS A + +
Sbjct: 70 REELVTEKEKLLQ--ERQDKVASLETEVSSLRKKGSSDSVELLSKAQARATELEKQVEVL 127
Query: 267 ISSIEQKTEGSERKQQMAKEYRVKVEKELREI 362
+EQK + E + E EK+L E+
Sbjct: 128 KKFLEQKNKEKELIEAQTSE----TEKKLNEL 155
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 27.1 bits (57), Expect = 7.7
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 90 KEELV-QRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 266
+EELV ++ KL + ER D +A+ EV+ + S++ LLS A + +
Sbjct: 70 REELVTEKEKLLQ--ERQDKVASLETEVSSLRKKGSSDSVELLSKAQARATELEKQVEVL 127
Query: 267 ISSIEQKTEGSERKQQMAKEYRVKVEKELREI 362
+EQK + E + E EK+L E+
Sbjct: 128 KKFLEQKNKEKELIEAQTSE----TEKKLNEL 155
>At1g18180.1 68414.m02260 expressed protein
Length = 292
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +1
Query: 76 RCPSTRKNWCNVPNW-----PNKLSDMTTW 150
+CP + WC+V W PN +M W
Sbjct: 164 KCPENKGKWCDVGVWKYSRHPNYFGEMLLW 193
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,225,312
Number of Sequences: 28952
Number of extensions: 210488
Number of successful extensions: 675
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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