Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312C08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    38   0.18 
UniRef50_Q7REN6 Cluster: Putative uncharacterized protein PY0502...    36   0.43 
UniRef50_Q22RU7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q54J92 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_A0V225 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A3Z4H8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q6LFM0 Cluster: DNA helicase, putative; n=1; Plasmodium...    32   6.9  
UniRef50_A5FK91 Cluster: Putative uncharacterized protein precur...    32   9.2  

>UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=1; Schizaphis graminum|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Schizaphis graminum (Aphid)
          Length = 556

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 12/36 (33%), Positives = 25/36 (69%)
 Frame = -1

Query: 263 FVMSILTMSINVYLSTYPIFLFLFYLINIVFFFFRY 156
           F+  ++  S N++L++Y +++ LF+L  ++ FFF Y
Sbjct: 521 FLKKLILFSQNIFLNSYKVYILLFFLWFLIIFFFNY 556


>UniRef50_Q7REN6 Cluster: Putative uncharacterized protein PY05028;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY05028 - Plasmodium yoelii
           yoelii
          Length = 424

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -1

Query: 371 NIKNVGINCGLRFFFNMDNT*IGTLSPSVGAKYECNFVMSILTMSINV---YLSTYPIFL 201
           NI  + I+   +  ++++   I  +S S+  +Y C+  ++I TMSI++   YL    IF+
Sbjct: 346 NIYTMSISIPCQHLYHVN---IYAMSTSIPCQYLCH--VNIYTMSISIPCQYLYHVNIFV 400

Query: 200 FLFYLINIVFFFF 162
           ++F+L+   FFFF
Sbjct: 401 YVFFLLFFFFFFF 413


>UniRef50_Q22RU7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 4640

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
 Frame = -1

Query: 404 SDRHGSRT*TFNIKNVGINCGLRFFFNMDNT*IGTLSPSVGAKYECNFVMSILTMSINVY 225
           S+ +G +T  FN K     C +        T   +L+ + G   +CN V+    +S+NV 
Sbjct: 238 SENNGVKTFNFNNKLNSYECEIVLLVYKP-TQFQSLNINCGDSNQCNIVIYSTQLSVNVQ 296

Query: 224 LSTYPIFLFLFY----LINIVFFFFRYNNINSK 138
           ++   + +F ++     I I FF F+  NIN++
Sbjct: 297 MNAPYLTVFNYFSMKGSIEIPFFVFQTANINTR 329


>UniRef50_Q54J92 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 55

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 233 NVYLSTYPIFLFLFYLINIVFFFFRYNNINS 141
           N+Y+  +P F F F+ + I+  ++ YNN  S
Sbjct: 5   NIYM-IFPFFFFFFFFLKIIILYYYYNNFKS 34


>UniRef50_A0V225 Cluster: Putative uncharacterized protein; n=1;
           Clostridium cellulolyticum H10|Rep: Putative
           uncharacterized protein - Clostridium cellulolyticum H10
          Length = 152

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 229 TLIDIVKMLITKLHSYLAPTEGDNVPIYVLSILKKNLRP 345
           TLIDI K + +K+   +A TE  +VPI  + + +  +RP
Sbjct: 3   TLIDINKAITSKIRQAIADTEYSDVPIPAIDVTESIIRP 41


>UniRef50_A3Z4H8 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. RS9917|Rep: Putative uncharacterized
           protein - Synechococcus sp. RS9917
          Length = 50

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/40 (35%), Positives = 29/40 (72%)
 Frame = -1

Query: 275 YECNFVMSILTMSINVYLSTYPIFLFLFYLINIVFFFFRY 156
           YE +F++ +++  ++++ ST+P F FLF    +VFF+++Y
Sbjct: 3   YEFSFML-VMSPLLSIF-STFPHFYFLFAAFLLVFFYWKY 40


>UniRef50_Q6LFM0 Cluster: DNA helicase, putative; n=1; Plasmodium
           falciparum 3D7|Rep: DNA helicase, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 1712

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = -1

Query: 275 YECNFVMSILTMSINVYLSTYPIF--LFLFYLINIVFFFFRY-----NNIN 144
           Y C  V  + T  + V    Y +F   F++ + N +F+FFRY     NNIN
Sbjct: 522 YLCGCVFPLCTYQLIVRYFIYKLFHTCFIYQIPNFIFYFFRYYYRINNNIN 572


>UniRef50_A5FK91 Cluster: Putative uncharacterized protein
           precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
           Putative uncharacterized protein precursor -
           Flavobacterium johnsoniae UW101
          Length = 359

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -1

Query: 308 IGTLSPSVGAKYECNFVMSILTMSINVYLSTYPIFLFLFYLINIVFFFFRYNNINS 141
           IG + P+VG K   N V  ++    N++L++Y     LF  + I +F    N   S
Sbjct: 111 IGIIEPNVGVKENLNLVTFLIKAFSNIFLTSYWFVPALFVTLVINYFIESKNLFKS 166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,486,303
Number of Sequences: 1657284
Number of extensions: 6968280
Number of successful extensions: 17844
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17628
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)