Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312C08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    26   0.18 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   0.94 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -1

Query: 281 AKYECNFVMSILTMSINVYLSTYPIFLFLFYLINIVFFFFRYNNINS 141
           AK+      SI      +Y   YP+ +FL Y I  ++  +    +N+
Sbjct: 13  AKFFAITPSSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRYMNA 59


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 235 IDIVKMLITKLHSYLAPTEGDNVPIYVLSI 324
           +D + ++   LH       G N P+Y  SI
Sbjct: 203 LDFINVMAYDLHGSWESVTGQNAPLYASSI 232


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 307 IYVLSILKKNLRPQFIPTFLILNVYV 384
           IY+  I+KKN+  Q    F+  NV++
Sbjct: 133 IYIDMIIKKNVTQQNSDVFIFDNVWL 158


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 492 NHQXV*XRHXFGVFFLKRLLY 430
           NHQ V   H FG F    L Y
Sbjct: 102 NHQLVYNCHTFGRFLAPNLTY 122


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +1

Query: 232 LIDIVKMLITKLHSYLAPTEGDNVPIY 312
           ++DI+ ++    H+  A    +N P+Y
Sbjct: 193 VLDIINVMTYDFHAMWAGFTAENSPLY 219


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 349 IVALGFFLIWT 317
           +VA  FFL+WT
Sbjct: 111 VVANAFFLLWT 121


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 272 ECNFVMSILTMSINVYLSTYPIFLFLFY 189
           EC  +  +  + + V  +TY IFL L +
Sbjct: 228 ECFGLQILGILFVGVIYTTYTIFLLLIF 255


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 275 YECNFVMSILTMSINVYLSTYPIFLFLFYLINIVFFF 165
           Y   +   I T+ +   L  Y   + LF+L+ I +F+
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,196
Number of Sequences: 336
Number of extensions: 2237
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)