Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312C02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 80 8e-16
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 58 3e-09
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 52 3e-07
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 52 3e-07
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 46 1e-05
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 41 5e-04
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 33 0.12
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 30 1.2
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81064-3|CAB02961.2| 268|Caenorhabditis elegans Hypothetical pr... 29 2.7
U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 80.2 bits (189), Expect = 8e-16
Identities = 37/79 (46%), Positives = 57/79 (72%)
Frame = +1
Query: 262 LFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAG 441
++ D +KAFD++ H+ L+ KL ++ +L++ + +FLSNRSFR R+ T SS + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 442 VPQGSALSPLLFSLFINDI 498
VPQG+ LSPLLF +++NDI
Sbjct: 77 VPQGAVLSPLLFGIYVNDI 95
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 70.9 bits (166), Expect = 5e-13
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VIGIHKPGKPKNNPTSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRANHS 183
VI I KP K +SYRPISLL + + S Q GF+ HS
Sbjct: 389 VIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAILKRIKNSIESPA----HQHGFKPEHS 444
Query: 184 CV*QVHRLTEHILVGLNRPKPIYTGALF-FDVAKAFDKVWHNGLIFKLFN-MGVPDSLVL 357
V ++T I+ GLN P + D+ AFDKV L L G+ + L
Sbjct: 445 TTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKL 504
Query: 358 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSALSPLLFSLFINDIPRSPPT 516
+ ++L R R + S L GVPQGS +SP LF+ ++ D+P T
Sbjct: 505 WLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDT 557
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 280 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGS 456
KAFD+V H+ L+ KL + G+ DFLS+R+F +V + P+++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 457 ALSPLLFSLFINDIPRSPPTS 519
P LF +FIN + S P S
Sbjct: 62 VSGPFLFLIFINSLLLSVPPS 82
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 51.6 bits (118), Expect = 3e-07
Identities = 35/117 (29%), Positives = 54/117 (46%)
Frame = +1
Query: 154 EQFGFRANHSCV*QVHRLTEHILVGLNRPKPIYTGALFFDVAKAFDKVWHNGLIFKLFNM 333
EQ GFR + S + +H L + VG P+ +F D KAFD V H + L
Sbjct: 655 EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDSVEHQAIWKSLDEQ 712
Query: 334 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSALSPLLFSLFINDIPR 504
G + + ++++ N + + R P+T GV QG +SP LFS + + R
Sbjct: 713 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 51.6 bits (118), Expect = 3e-07
Identities = 35/117 (29%), Positives = 54/117 (46%)
Frame = +1
Query: 154 EQFGFRANHSCV*QVHRLTEHILVGLNRPKPIYTGALFFDVAKAFDKVWHNGLIFKLFNM 333
EQ GFR + S + +H L + VG P+ +F D KAFD V H + L
Sbjct: 394 EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDSVEHQAIWKSLDEQ 451
Query: 334 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSALSPLLFSLFINDIPR 504
G + + ++++ N + + R P+T GV QG +SP LFS + + R
Sbjct: 452 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 51.2 bits (117), Expect = 4e-07
Identities = 35/117 (29%), Positives = 54/117 (46%)
Frame = +1
Query: 154 EQFGFRANHSCV*QVHRLTEHILVGLNRPKPIYTGALFFDVAKAFDKVWHNGLIFKLFNM 333
EQ GFR + S + +H L + VG P+ +F D KAFD V H + L
Sbjct: 484 EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTL--VFIDFKKAFDTVEHQAIWKSLDEQ 541
Query: 334 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSALSPLLFSLFINDIPR 504
G + + ++++ N + + R P+T GV QG +SP LFS + + R
Sbjct: 542 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 597
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 319 KLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRS-SPRPLTAGVPQGSALSPLLFSLFIND 495
KL G+ ++FL NR+F ++ S + P+++GVPQGS PLLF LFIN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 496 I 498
+
Sbjct: 899 L 899
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 262 LFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRV-EGTRSSPRPLTA 438
+ F ++ AFDKV H LI KL + V +L R +S ++F +V + S
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 439 GVPQGSALSPLLFSLFINDI 498
G P+GS +F +FIN +
Sbjct: 950 GAPRGSESRQFMFLVFINSL 969
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +1
Query: 262 LFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAG 441
+F D KAFD V H + L G ++ + ++++ N + + R P+T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 442 VPQGSALSPLLFSLFINDIPR 504
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 497 ISLINKLNRSGERAEPCGTPAVSGRGEER 411
ISL N +GER +PCGTP + G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 280 KAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSA 459
KAFD V + L GV + ++++ ++ S + ++ P+T GV QG
Sbjct: 469 KAFDSVEPEDVWDSLQQQGVQRGYINLLQECYTDCSTTF-TPFHKNVTVPVTRGVRQGDP 527
Query: 460 LSPLLFSLFINDIPR 504
+SP LFS + + R
Sbjct: 528 ISPNLFSACLEHVFR 542
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 331 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSALS 465
+ +PD ++I R+ R V GT+SSP PLT V G A S
Sbjct: 405 LDLPDHYLMIFREEAHPIFMRRFVNGTQSSPIPLTDLVWSGWANS 449
>Z81064-3|CAB02961.2| 268|Caenorhabditis elegans Hypothetical
protein F16B12.4 protein.
Length = 268
Score = 28.7 bits (61), Expect = 2.7
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = -3
Query: 324 KFENQTVVPDFVERFCDVEEEGSRV------DRFWSVKSYENVLRET-VHLLYA*VICTE 166
K EN +PDF+E CD ++ + D ++ VLRET + A IC+
Sbjct: 57 KAENLAEIPDFIEEKCDEFDDDEYILQPTGEDSKFTHNDMNRVLRETGLPTEVAFGICS- 115
Query: 165 SELFIDENALG*DEVSEAFVEQTLV-QFAQRHEEANWAVTR 46
F D N E+S+ FV ++ QF Q A A TR
Sbjct: 116 ---FNDYNVAETIEMSKDFVVPDMIPQFVQDIFVAKIAETR 153
>U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical
protein W09C3.1 protein.
Length = 439
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 435 REWSRGGAGSFYSISKRAVRQEVPYDEHETVRYAHVEKFENQTVV 301
RE RG G+ Y +S ++ +QE + ++ KFE + +V
Sbjct: 37 RELGRGAFGTVYHVSNKSTKQEAALKIEKMTAGDNLLKFEREIMV 81
>Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical
protein T08G3.7 protein.
Length = 943
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 521 LLVGGDRGISLINKLNRSGERAEPCGTPAVSGRGEERVPSTRYRKERLDKKSRMMST 351
+L+ ++L+N LN++ E+ P TP S E++ R ++ + K M+T
Sbjct: 664 ILIEHGADLTLLNTLNKTPEQMIPLATPDHSKDMVEKLEKIRVMYKKANGKKYRMTT 720
>Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical
protein F59F4.3 protein.
Length = 494
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 199 HRLTEHILVGLNRPKPIYTGALFFDVAKAFDKVW 300
+RLT L N IYT ++F + K++D +W
Sbjct: 14 YRLTLACLAHFNWCMSIYTNCVYFTLWKSYDLLW 47
>AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical
protein Y65B4BL.1 protein.
Length = 422
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 378 RQEVPYDEHETVRYAHVEKFENQTVVPDFVERFCDVE 268
RQ+VP + H Y H E +T++ + CD++
Sbjct: 309 RQQVPSNCHSLCTYEHREHVAAETLIQAIQQEHCDMK 345
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 276 DVEEEGSRVDRFWSVKSYENVLRETVHLLY 187
DV+E+G R WS KS+++V+ H LY
Sbjct: 498 DVDEKGVRPTVDWSKKSHDHVVILFSHSLY 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,101,600
Number of Sequences: 27780
Number of extensions: 254868
Number of successful extensions: 811
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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