BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312C02f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 0.36
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 0.62
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 1.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 1.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 1.9
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 2.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.3
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 3.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 5.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 5.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 7.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.7
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.4 bits (53), Expect = 0.36
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -3
Query: 354 HETVRYAHVEKFENQTVVPDFVERFCDVEEEGSRVDRFWSVKSYENVLRETVHLLYA*VI 175
HE + + +F Q PD R DV EE + +FW K + + V L+
Sbjct: 183 HEGRKQFYFHQFYKQQ--PDLNYRNSDVREEMKNIMKFWLDKGIDGFRIDAVPHLF---- 236
Query: 174 CTESELFIDENALG 133
+ + +DE LG
Sbjct: 237 -ESANISLDEPPLG 249
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.6 bits (51), Expect = 0.62
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 280 KAFDKVWHNGLIFKLFNMG 336
KA+ KV N +IF+++ MG
Sbjct: 1542 KAYQKVEENEIIFEIYKMG 1560
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH TV ++EK EN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 357 EHETVRYAHVEKFENQT 307
EH+TV ++EK EN++
Sbjct: 180 EHDTVLVVNIEKSENES 196
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 362 YGTSCLTALFDIE*KEPAPPRD 427
+GT + + FD + K+ PP D
Sbjct: 338 FGTPRIMSSFDFQSKDQGPPND 359
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 3.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 340 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGSALSPLL 474
PD VL + LS V+ T +SP + G+ G+ L+ +L
Sbjct: 335 PDHAVLCVYMGLSMVEAIKYVQQTTNSPVDMRVGIHTGAVLAGVL 379
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 330 VEKFENQTVVPDFVERFCDVEEEGSR 253
VE +EN+ +P+ E F D+ + R
Sbjct: 343 VEGWENRATIPELNEEFRDLRLQDLR 368
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 119 ETSSHPRAFSSMNNSDSVQITHAYN 193
ETS P+ SS++N+ + YN
Sbjct: 74 ETSKEPKIISSLSNNYKYSNYNNYN 98
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 119 ETSSHPRAFSSMNNSDSVQITHAYN 193
ETS P+ SS++N+ + YN
Sbjct: 74 ETSKEPKIISSLSNNYKYSNYNNYN 98
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 360 DEHETVRYAHVEKFENQT 307
+EH+TV ++EK N++
Sbjct: 190 EEHDTVLVVNIEKSGNES 207
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 333 GRTGQSRAHHTG 368
G +GQS +HH G
Sbjct: 396 GHSGQSSSHHHG 407
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,058
Number of Sequences: 438
Number of extensions: 3179
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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