Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 304 EYTLVAGIKTAKINNLLDVTEN 369
           ++T VAG+ T  + NLL V ++
Sbjct: 472 KFTFVAGLATLSVLNLLSVIKS 493


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 16  YGLISIRGMEKKMMVDGNLI 75
           YGL  +R MEK+ +V G  +
Sbjct: 509 YGLPFVRSMEKQAIVAGGTL 528


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 410 ICFLISCSMVLPHQFSVTSNKLFIF 336
           +C L S  ++  HQ    ++K+  F
Sbjct: 5   LCLLASALLISTHQTEAKTDKILCF 29


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 95  LWSNSIWTVKVKLWA*SMLFL 157
           +WS +I  V   +W  S LFL
Sbjct: 1   MWSENITDVLKHVWFLSKLFL 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,757
Number of Sequences: 336
Number of extensions: 2786
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)