Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA ...   144   8e-35
AY071639-1|AAL49261.1|  259|Drosophila melanogaster RE68357p pro...    29   3.8  
AE014296-1166|AAF50633.1|  259|Drosophila melanogaster CG10075-P...    29   3.8  

>AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA
            protein.
          Length = 3115

 Score =  144 bits (348), Expect = 8e-35
 Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 10/175 (5%)
 Frame = +1

Query: 1    DNNCKYGLISIRGMEKKMMVDGNLIERNNGQFMVQFHMDSQSEIMGLVYAVFVYNKVKNN 180
            +NNC   LIS+ GMEK++  D N  E NN +F++ F  DS SEI+G V A   +N  K N
Sbjct: 1622 ENNCPGALISLDGMEKRLRFDNNRFESNNAKFVLLFKADSLSEIIGQVPASIEFNSFKGN 1681

Query: 181  QYASF----------VNRGAQLRTVDPTCVIGFKGIQKVKVSRNLFGGNALEYTLVAGIK 330
               +           V R  + +   PT VI   G+Q V++ RNL   N ++Y LVAG++
Sbjct: 1682 NIVTMTANYRNHYMKVARRIRKQHKIPTAVIRLDGVQNVRLYRNLIAENEMDYNLVAGVR 1741

Query: 331  TAKINNLLDVTENWWGSTIEQEIKKQIFDFDDWXNHAIAVYLPYLLEEDFEASLS 495
            +A++NN  +  ENWWG+     I+ +IFDFD+W +HA  +Y P+L+E+ ++AS+S
Sbjct: 1742 SARLNNYFEARENWWGTKDTAFIEAKIFDFDNWNDHADVIYQPFLIEDSYDASVS 1796



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
 Frame = +1

Query: 49   KMMVDGNLIERNNGQFMVQFHMDSQSEIMGLVYAVFVYNKVKNNQYA---------SFVN 201
            K+++  N   RN+G  +V   +   S    + Y +F  N V+ N            S  +
Sbjct: 791  KLIIQSNYFMRNSGVHVVSLGLSPYSRAE-VQYILFTRNFVRGNNITEAFGPLIAGSEGS 849

Query: 202  RGA-QLRTVDPTCVIGFKGIQKVKVSRNLFGGNALEYTLVAGIKTAKINNLLDVTENWWG 378
             GA +L            G   V + RN+   + L+     G +    + +++ T NW G
Sbjct: 850  DGAGRLNPRSRVAAPVVVGSSNVDIFRNIL--HNLDSMYEIGSQLTDQSKIINATCNWLG 907

Query: 379  STIEQEIKKQIFDFDDWXNHAIAVYLPYLL 468
             T E +I  ++F  +D  N A   YLPYLL
Sbjct: 908  HTDENKIYARLFHRNDRYNLAKINYLPYLL 937


>AY071639-1|AAL49261.1|  259|Drosophila melanogaster RE68357p
           protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 179 INTRASLIGEHNLGR*TQHVSSVSKEF 259
           +NTRA  +G HN  R  Q + ++S++F
Sbjct: 158 VNTRAKKLGAHNPSRTRQQIETLSEQF 184


>AE014296-1166|AAF50633.1|  259|Drosophila melanogaster CG10075-PA
           protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 179 INTRASLIGEHNLGR*TQHVSSVSKEF 259
           +NTRA  +G HN  R  Q + ++S++F
Sbjct: 158 VNTRAKKLGAHNPSRTRQQIETLSEQF 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,964,113
Number of Sequences: 53049
Number of extensions: 464780
Number of successful extensions: 991
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)