Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312B12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF172939-1|AAD47881.1|  121|Drosophila melanogaster Yippee prote...   194   8e-50
AF139189-1|AAD28537.1|  121|Drosophila melanogaster putative zin...   194   8e-50
AE014298-1902|AAF48266.1|  121|Drosophila melanogaster CG1989-PA...   194   8e-50
AY118569-1|AAM49938.1|  110|Drosophila melanogaster LD40977p pro...   169   2e-42
AE014298-1903|ABC67182.1|  110|Drosophila melanogaster CG1989-PB...   169   2e-42
AY060270-1|AAL25309.1|  114|Drosophila melanogaster GH10478p pro...   103   1e-22
AE014298-1418|AAF46560.1|  114|Drosophila melanogaster CG15309-P...   103   1e-22
AE014298-2812|AAF48930.1|  315|Drosophila melanogaster CG7914-PA...    33   0.18 
AY071372-1|AAL48994.1|  392|Drosophila melanogaster RE40275p pro...    29   2.9  
AE014297-3833|AAF56491.1|  392|Drosophila melanogaster CG4730-PA...    29   2.9  

>AF172939-1|AAD47881.1|  121|Drosophila melanogaster Yippee protein
           protein.
          Length = 121

 Score =  194 bits (472), Expect = 8e-50
 Identities = 84/111 (75%), Positives = 101/111 (90%)
 Frame = +2

Query: 53  MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 232
           MG+IFL+H+GG +LF+CA C  NLTNRS+LISTRFTGATGRA+LF +VVNL +S +Q+RV
Sbjct: 1   MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERV 60

Query: 233 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 385
           MLTGRHMVRDV CKNCG KLGW+YEFATEE+Q+YKEGRVILE AL+TE++G
Sbjct: 61  MLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILEYALITEAEG 111


>AF139189-1|AAD28537.1|  121|Drosophila melanogaster putative
           zinc-binding protein protein.
          Length = 121

 Score =  194 bits (472), Expect = 8e-50
 Identities = 84/111 (75%), Positives = 101/111 (90%)
 Frame = +2

Query: 53  MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 232
           MG+IFL+H+GG +LF+CA C  NLTNRS+LISTRFTGATGRA+LF +VVNL +S +Q+RV
Sbjct: 1   MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERV 60

Query: 233 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 385
           MLTGRHMVRDV CKNCG KLGW+YEFATEE+Q+YKEGRVILE AL+TE++G
Sbjct: 61  MLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILEYALITEAEG 111


>AE014298-1902|AAF48266.1|  121|Drosophila melanogaster CG1989-PA,
           isoform A protein.
          Length = 121

 Score =  194 bits (472), Expect = 8e-50
 Identities = 84/111 (75%), Positives = 101/111 (90%)
 Frame = +2

Query: 53  MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 232
           MG+IFL+H+GG +LF+CA C  NLTNRS+LISTRFTGATGRA+LF +VVNL +S +Q+RV
Sbjct: 1   MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERV 60

Query: 233 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 385
           MLTGRHMVRDV CKNCG KLGW+YEFATEE+Q+YKEGRVILE AL+TE++G
Sbjct: 61  MLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILEYALITEAEG 111


>AY118569-1|AAM49938.1|  110|Drosophila melanogaster LD40977p
           protein.
          Length = 110

 Score =  169 bits (411), Expect = 2e-42
 Identities = 76/112 (67%), Positives = 93/112 (83%)
 Frame = +2

Query: 53  MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 232
           MG+IFL+H+GG +LF+CA C  NLTNRS+LISTRFTGATGRA+LF +VVNL +S +Q+RV
Sbjct: 1   MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERV 60

Query: 233 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGI 388
           MLTGRHMVRDV CKNCG KLGW+YEFATEE+Q++    V  +R LVT   G+
Sbjct: 61  MLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKW----VNADRQLVTRDSGL 108


>AE014298-1903|ABC67182.1|  110|Drosophila melanogaster CG1989-PB,
           isoform B protein.
          Length = 110

 Score =  169 bits (411), Expect = 2e-42
 Identities = 76/112 (67%), Positives = 93/112 (83%)
 Frame = +2

Query: 53  MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDRV 232
           MG+IFL+H+GG +LF+CA C  NLTNRS+LISTRFTGATGRA+LF +VVNL +S +Q+RV
Sbjct: 1   MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERV 60

Query: 233 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGI 388
           MLTGRHMVRDV CKNCG KLGW+YEFATEE+Q++    V  +R LVT   G+
Sbjct: 61  MLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKW----VNADRQLVTRDSGL 108


>AY060270-1|AAL25309.1|  114|Drosophila melanogaster GH10478p
           protein.
          Length = 114

 Score =  103 bits (248), Expect = 1e-22
 Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +2

Query: 53  MGKIFLDHIGGT-RLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDR 229
           M K F  ++  T R +SC  C  +L +  ELIS  F G+ G A+LF+ VVN+   + ++R
Sbjct: 1   MVKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVVNVACGQTEER 60

Query: 230 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 385
           V+LTG H V D+ C+ C T LGW YE A E +Q+YKEG+ I+E A + + +G
Sbjct: 61  VLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKFIIELAHMIKENG 112


>AE014298-1418|AAF46560.1|  114|Drosophila melanogaster CG15309-PA
           protein.
          Length = 114

 Score =  103 bits (248), Expect = 1e-22
 Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +2

Query: 53  MGKIFLDHIGGT-RLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQDR 229
           M K F  ++  T R +SC  C  +L +  ELIS  F G+ G A+LF+ VVN+   + ++R
Sbjct: 1   MVKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVVNVACGQTEER 60

Query: 230 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 385
           V+LTG H V D+ C+ C T LGW YE A E +Q+YKEG+ I+E A + + +G
Sbjct: 61  VLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKFIIELAHMIKENG 112


>AE014298-2812|AAF48930.1|  315|Drosophila melanogaster CG7914-PA
           protein.
          Length = 315

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 145 KYAIYWSYRSCILIP-QGCESNLFGSSGSC 231
           ++A +W+YRSC+ +P Q C+S+    +G C
Sbjct: 215 EFAQFWNYRSCLYLPHQQCDSSACQEAGHC 244


>AY071372-1|AAL48994.1|  392|Drosophila melanogaster RE40275p
           protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +2

Query: 269 CKNCGTKLGWVYEFATE---ENQRYKEGRVILERALVTESDGIEEIQVNVDD*NENMFV 436
           CK C  +L W Y+F  +    NQ+ +E  V  E A   + D +E+ + N  D NE   +
Sbjct: 98  CKRCAVELKWAYDFHKKMAIANQQLREIFVATE-ANTEQEDDVED-EENEADMNEEFLM 154


>AE014297-3833|AAF56491.1|  392|Drosophila melanogaster CG4730-PA
           protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +2

Query: 269 CKNCGTKLGWVYEFATE---ENQRYKEGRVILERALVTESDGIEEIQVNVDD*NENMFV 436
           CK C  +L W Y+F  +    NQ+ +E  V  E A   + D +E+ + N  D NE   +
Sbjct: 98  CKRCAVELKWAYDFHKKMAIANQQLREIFVATE-ANTEQEDDVED-EENEADMNEEFLM 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,873,244
Number of Sequences: 53049
Number of extensions: 360189
Number of successful extensions: 990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)