Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312B09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    32   0.22 
Z74029-2|CAA98432.1|  334|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z66521-12|CAA91397.3|  614|Caenorhabditis elegans Hypothetical p...    27   8.1  

>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = -2

Query: 394 KFYPGLKVYL-----V*TTFIFVIKGAFCFVLVL*CVDFDRASSSTNEFSRSLGCY-DTG 233
           +F+PG  VY      + TT   +++ A  F+    C+ F+  S++TN     +GCY DTG
Sbjct: 210 QFWPGKVVYYYFDSGLTTTVQQIVRDAITFLESNTCLKFELNSTATNRIFSGVGCYSDTG 269


>Z74029-2|CAA98432.1|  334|Caenorhabditis elegans Hypothetical
           protein C45B11.4 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -2

Query: 94  TWGRRNMFSPSILLYHIPYHSPLTHIVFHTT 2
           +W   ++FS S+L++ +P H+   H +F+ T
Sbjct: 26  SWQGLSLFSHSLLIFFLPMHALTIHCIFNKT 56


>Z66521-12|CAA91397.3|  614|Caenorhabditis elegans Hypothetical
           protein W02B12.4 protein.
          Length = 614

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 82  RNMFSPSILLYHIPYHSP 29
           R+  SP + LYH PY +P
Sbjct: 457 RSQVSPDLYLYHFPYFNP 474


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,857,559
Number of Sequences: 27780
Number of extensions: 268378
Number of successful extensions: 602
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)