BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS312B09f (521 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g22740.2 68415.m02696 SET domain-containing protein (SUVH6) i... 29 1.9 At2g22740.1 68415.m02695 SET domain-containing protein (SUVH6) i... 29 1.9 At1g71110.1 68414.m08206 expressed protein 29 2.5 At1g61680.1 68414.m06957 terpene synthase/cyclase family protein... 27 5.8 >At2g22740.2 68415.m02696 SET domain-containing protein (SUVH6) identical to SUVH6 [Arabidopsis thaliana] GI:13517753; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain Length = 790 Score = 29.1 bits (62), Expect = 1.9 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = +3 Query: 63 EGENMLRRPQVTGRRAEENDDD----LR*ASRGNKNCFLLFQCFYSIFNVNFAYDHAGSY 230 +G + L GR E D+ + AS+GN F+ C +++ N YDH S Sbjct: 678 QGMSELMLGTQAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSR 737 Query: 231 LP 236 +P Sbjct: 738 IP 739 >At2g22740.1 68415.m02695 SET domain-containing protein (SUVH6) identical to SUVH6 [Arabidopsis thaliana] GI:13517753; contains Pfam profiles PF00856: SET domain, PF05033: Pre-SET motif, PF02182: YDG/SRA domain Length = 790 Score = 29.1 bits (62), Expect = 1.9 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = +3 Query: 63 EGENMLRRPQVTGRRAEENDDD----LR*ASRGNKNCFLLFQCFYSIFNVNFAYDHAGSY 230 +G + L GR E D+ + AS+GN F+ C +++ N YDH S Sbjct: 678 QGMSELMLGTQAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSR 737 Query: 231 LP 236 +P Sbjct: 738 IP 739 >At1g71110.1 68414.m08206 expressed protein Length = 513 Score = 28.7 bits (61), Expect = 2.5 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 3/38 (7%) Frame = -3 Query: 144 WKLTLNHHHSPLPFSQSPG-VGATCFLLPYSS--IIYH 40 W +T NH+ + + F+ +PG + A +LL + S ++YH Sbjct: 89 WNITNNHYWASVGFTGAPGFILAVIWLLSFGSLLVVYH 126 >At1g61680.1 68414.m06957 terpene synthase/cyclase family protein similar to 1,8-cineole synthase [GI:3309117][Salvia officinalis]; contains Pfam profile: PF01397 terpene synthase family Length = 569 Score = 27.5 bits (58), Expect = 5.8 Identities = 8/26 (30%), Positives = 18/26 (69%) Frame = -3 Query: 273 LMNFPGALDAMTPVNSYQRGHMQNLH 196 + FP +D+++P N+ +R ++N+H Sbjct: 27 ISKFPNTVDSLSPANTAKRSILRNVH 52 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,878,784 Number of Sequences: 28952 Number of extensions: 241352 Number of successful extensions: 543 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 540 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 543 length of database: 12,070,560 effective HSP length: 76 effective length of database: 9,870,208 effective search space used: 957410176 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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