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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312B09f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g22740.2 68415.m02696 SET domain-containing protein (SUVH6) i...    29   1.9  
At2g22740.1 68415.m02695 SET domain-containing protein (SUVH6) i...    29   1.9  
At1g71110.1 68414.m08206 expressed protein                             29   2.5  
At1g61680.1 68414.m06957 terpene synthase/cyclase family protein...    27   5.8  

>At2g22740.2 68415.m02696 SET domain-containing protein (SUVH6)
           identical to SUVH6 [Arabidopsis thaliana] GI:13517753;
           contains Pfam profiles PF00856: SET domain, PF05033:
           Pre-SET motif, PF02182: YDG/SRA domain
          Length = 790

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +3

Query: 63  EGENMLRRPQVTGRRAEENDDD----LR*ASRGNKNCFLLFQCFYSIFNVNFAYDHAGSY 230
           +G + L      GR   E D+     +  AS+GN   F+   C  +++  N  YDH  S 
Sbjct: 678 QGMSELMLGTQAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSR 737

Query: 231 LP 236
           +P
Sbjct: 738 IP 739


>At2g22740.1 68415.m02695 SET domain-containing protein (SUVH6)
           identical to SUVH6 [Arabidopsis thaliana] GI:13517753;
           contains Pfam profiles PF00856: SET domain, PF05033:
           Pre-SET motif, PF02182: YDG/SRA domain
          Length = 790

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +3

Query: 63  EGENMLRRPQVTGRRAEENDDD----LR*ASRGNKNCFLLFQCFYSIFNVNFAYDHAGSY 230
           +G + L      GR   E D+     +  AS+GN   F+   C  +++  N  YDH  S 
Sbjct: 678 QGMSELMLGTQAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSR 737

Query: 231 LP 236
           +P
Sbjct: 738 IP 739


>At1g71110.1 68414.m08206 expressed protein
          Length = 513

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = -3

Query: 144 WKLTLNHHHSPLPFSQSPG-VGATCFLLPYSS--IIYH 40
           W +T NH+ + + F+ +PG + A  +LL + S  ++YH
Sbjct: 89  WNITNNHYWASVGFTGAPGFILAVIWLLSFGSLLVVYH 126


>At1g61680.1 68414.m06957 terpene synthase/cyclase family protein
           similar to 1,8-cineole synthase [GI:3309117][Salvia
           officinalis]; contains Pfam profile: PF01397 terpene
           synthase family
          Length = 569

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 273 LMNFPGALDAMTPVNSYQRGHMQNLH 196
           +  FP  +D+++P N+ +R  ++N+H
Sbjct: 27  ISKFPNTVDSLSPANTAKRSILRNVH 52


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,878,784
Number of Sequences: 28952
Number of extensions: 241352
Number of successful extensions: 543
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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