Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312B07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 151 4e-37
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 149 1e-36
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 148 3e-36
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 143 9e-35
12_01_0254 + 1885412-1885683,1886123-1886389,1886501-1887077 29 3.0
11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989 29 3.0
09_04_0261 + 16207565-16207825,16207935-16208087,16208191-162083... 28 5.2
04_03_0351 - 14761728-14763086,14764742-14764957 27 6.9
03_01_0489 - 3709709-3709864,3710166-3710318,3710408-3710626 27 6.9
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 151 bits (365), Expect = 4e-37
Identities = 73/111 (65%), Positives = 85/111 (76%)
Frame = -2
Query: 520 DGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAET 341
DGKT+EAEAAHGTVTRHFR +Q+G ETSTN IASIFAWTRGL HRAKLD+N L +FA
Sbjct: 299 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFALK 358
Query: 340 LEKVCIETIESGIMTKDLAICIKGMNNVKRSDYYETFEFMDKLAENLKVAL 188
LE C+ T+ESG MTKDLA+ I G +NV RS Y T EF+D +A L+ L
Sbjct: 359 LEAACVGTVESGKMTKDLALLIHGSSNVTRSHYLNTEEFIDAVAAELRSRL 409
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 149 bits (361), Expect = 1e-36
Identities = 70/111 (63%), Positives = 85/111 (76%)
Frame = -2
Query: 520 DGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAET 341
DGKT+EAEAAHGTVTRH+R +Q+G ETSTN IASIFAWTRGL HRAKLD+N L +F +
Sbjct: 299 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLDFTQK 358
Query: 340 LEKVCIETIESGIMTKDLAICIKGMNNVKRSDYYETFEFMDKLAENLKVAL 188
LE CI +ESG MTKDLA+ + G +NV RS Y T EF+D +A+ L+ L
Sbjct: 359 LEAACIGAVESGKMTKDLALLVHGSSNVTRSHYLNTEEFIDAVADELRSRL 409
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 148 bits (358), Expect = 3e-36
Identities = 72/108 (66%), Positives = 84/108 (77%)
Frame = -2
Query: 520 DGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAET 341
DGKT+EAEAAHGTVTRHFR +Q+G+ETSTN IASIFAWTRGL HRAKLD ND L +F +
Sbjct: 333 DGKTLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDKNDRLLDFTKK 392
Query: 340 LEKVCIETIESGIMTKDLAICIKGMNNVKRSDYYETFEFMDKLAENLK 197
LE CIET+ESG MTKDLA+ I G V R Y T EF+D +A+ L+
Sbjct: 393 LESACIETVESGKMTKDLALLIHG-PKVTREFYLNTEEFIDAVAQQLR 439
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 143 bits (346), Expect = 9e-35
Identities = 68/111 (61%), Positives = 84/111 (75%)
Frame = -2
Query: 520 DGKTVEAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAET 341
DG+T+EAEAAHGTVTRH+R +Q+G ETSTN IASIFAWT GL HRAKLD+N L +F +
Sbjct: 360 DGRTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTTGLGHRAKLDDNKRLLDFVQK 419
Query: 340 LEKVCIETIESGIMTKDLAICIKGMNNVKRSDYYETFEFMDKLAENLKVAL 188
LE C+ T+ESG MTKDLA+ + G NV R Y T EF+D +AE+L+ L
Sbjct: 420 LEAACVGTVESGKMTKDLALLVHG-PNVSRDKYLNTVEFIDAVAEDLRTRL 469
>12_01_0254 + 1885412-1885683,1886123-1886389,1886501-1887077
Length = 371
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 520 DGKTVEAEAAHGTVTRHFRFYQQGKETSTN 431
DGKT+EA + HG V + F+ + +E N
Sbjct: 326 DGKTIEAMSVHGDVRKLFKSISEVEEKDGN 355
>11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989
Length = 371
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 520 DGKTVEAEAAHGTVTRHFRFYQQGKETSTN 431
DGKT+EA + HG V + F+ + +E N
Sbjct: 326 DGKTIEAMSVHGDVRKLFKSISEVEEKDGN 355
>09_04_0261 +
16207565-16207825,16207935-16208087,16208191-16208316,
16208595-16208847,16209303-16209485,16209486-16209582,
16209706-16209769,16209904-16210053,16210215-16210387,
16210497-16210536,16211170-16211223
Length = 517
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -2
Query: 508 VEAEAAHGT-----VTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAE 344
+EA A HG R+ R ++ T+T P S+F R L D+N + +
Sbjct: 64 IEATARHGARKENPKVRNRRLQKKFNGTATKPRLSVFCSNRQLYAMLVDDHNKKILFYGS 123
Query: 343 TLEK-VC 326
TL+K +C
Sbjct: 124 TLQKAIC 130
>04_03_0351 - 14761728-14763086,14764742-14764957
Length = 524
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 400 GLLHRAKLDNNDALKNFAETLEKVCIE 320
G+ HR K++N + + A+ L+ VCI+
Sbjct: 497 GMRHRLKIENVEVSEETAKLLDSVCID 523
>03_01_0489 - 3709709-3709864,3710166-3710318,3710408-3710626
Length = 175
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -2
Query: 508 VEAEAAHGT-----VTRHFRFYQQGKETSTNPIASIFAWTRGLLHRAKLDNNDALKNFAE 344
+EA A HG R+ R ++ T+T P S+F R L D+N + +
Sbjct: 50 IEATARHGARKENPKVRNRRLQKKFNGTATKPRLSVFCSNRQLYAMLVDDHNRKILFYGS 109
Query: 343 TLEK-VC 326
TL+K +C
Sbjct: 110 TLQKAIC 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,669,624
Number of Sequences: 37544
Number of extensions: 203289
Number of successful extensions: 387
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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