Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312B05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.9  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 73  YYREIKRFHGVRTKYLRK 20
           YY+ IK  +G   K++RK
Sbjct: 134 YYKPIKTLNGHEIKFIRK 151


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 103 ILPVWGAFTD*NI*FLVNSCFKSL 174
           +L  W AF   N+ ++ N C+ ++
Sbjct: 271 LLTFWSAFFIVNVLYICNQCYNTV 294


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 294 FFKPNVLSSITFSFFFCSVFLLAPLGFLGGMVRFRLVTF 178
           +F+  VL  + F+FF     LL     L   +RF+L  F
Sbjct: 152 YFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKLRFF 190


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 294 FFKPNVLSSITFSFFFCSVFLLAPLGFLGGMVRFRLVTF 178
           +F+  VL  + F+FF     LL     L   +RF+L  F
Sbjct: 152 YFQMYVLFFVNFAFFVVVKMLLVRYRNLTKQLRFKLRFF 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,498
Number of Sequences: 336
Number of extensions: 1884
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)