Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312B05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113336-1|AAM29341.1|  404|Drosophila melanogaster AT31705p pro...   125   4e-29
AY060945-1|AAL28493.1|  404|Drosophila melanogaster GM08440p pro...   125   4e-29
AE013599-679|AAF59063.1|  404|Drosophila melanogaster CG8635-PA ...   125   4e-29
D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life typ...    29   5.1  
AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p pro...    29   5.1  
AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,...    29   5.1  
AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,...    29   5.1  

>AY113336-1|AAM29341.1|  404|Drosophila melanogaster AT31705p
           protein.
          Length = 404

 Score =  125 bits (301), Expect = 4e-29
 Identities = 65/106 (61%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = +2

Query: 203 MPPKK-PSGASXXXXXXXXXXVIEDKTFGLKNKKGAKQQKFIQQVEKQVKSGGVHPVKPV 379
           MPPKK P G S          VIEDKTFGLKNKKG KQQKFIQQV+KQV+SGG HP +  
Sbjct: 1   MPPKKAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQQKFIQQVQKQVQSGGQHPRQDG 60

Query: 380 EDXXXXXXXXXXXXXXXAALFKPVQTQKVEKGTDPKSVXCAFFKQG 517
           +                A +FKPVQTQKVEKGTDPKSV CAFFKQG
Sbjct: 61  DKRKEEKEKKLAEQREMALIFKPVQTQKVEKGTDPKSVVCAFFKQG 106


>AY060945-1|AAL28493.1|  404|Drosophila melanogaster GM08440p
           protein.
          Length = 404

 Score =  125 bits (301), Expect = 4e-29
 Identities = 65/106 (61%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = +2

Query: 203 MPPKK-PSGASXXXXXXXXXXVIEDKTFGLKNKKGAKQQKFIQQVEKQVKSGGVHPVKPV 379
           MPPKK P G S          VIEDKTFGLKNKKG KQQKFIQQV+KQV+SGG HP +  
Sbjct: 1   MPPKKAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQQKFIQQVQKQVQSGGQHPRQDG 60

Query: 380 EDXXXXXXXXXXXXXXXAALFKPVQTQKVEKGTDPKSVXCAFFKQG 517
           +                A +FKPVQTQKVEKGTDPKSV CAFFKQG
Sbjct: 61  DKRKEEKEKKLAEQREMALIFKPVQTQKVEKGTDPKSVVCAFFKQG 106


>AE013599-679|AAF59063.1|  404|Drosophila melanogaster CG8635-PA
           protein.
          Length = 404

 Score =  125 bits (301), Expect = 4e-29
 Identities = 65/106 (61%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = +2

Query: 203 MPPKK-PSGASXXXXXXXXXXVIEDKTFGLKNKKGAKQQKFIQQVEKQVKSGGVHPVKPV 379
           MPPKK P G S          VIEDKTFGLKNKKG KQQKFIQQV+KQV+SGG HP +  
Sbjct: 1   MPPKKAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQQKFIQQVQKQVQSGGQHPRQDG 60

Query: 380 EDXXXXXXXXXXXXXXXAALFKPVQTQKVEKGTDPKSVXCAFFKQG 517
           +                A +FKPVQTQKVEKGTDPKSV CAFFKQG
Sbjct: 61  DKRKEEKEKKLAEQREMALIFKPVQTQKVEKGTDPKSVVCAFFKQG 106


>D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life type 2
           protein.
          Length = 2044

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 337 KTSEERWSTSSQTC*GQEKGK-RTKTQRAEGVGGTVQTCPNSE 462
           KT    W T  Q+  G ++GK R    R  G GG  Q   NS+
Sbjct: 171 KTDIVEWLTKMQSSSGTDRGKSRRSHHRRNGSGGDAQPRSNSQ 213


>AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p
           protein.
          Length = 2061

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 337 KTSEERWSTSSQTC*GQEKGK-RTKTQRAEGVGGTVQTCPNSE 462
           KT    W T  Q+  G ++GK R    R  G GG  Q   NS+
Sbjct: 171 KTDIVEWLTKMQSSSGTDRGKSRRSHHRRNGSGGDAQPRSNSQ 213


>AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,
           isoform A protein.
          Length = 2052

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 337 KTSEERWSTSSQTC*GQEKGK-RTKTQRAEGVGGTVQTCPNSE 462
           KT    W T  Q+  G ++GK R    R  G GG  Q   NS+
Sbjct: 171 KTDIVEWLTKMQSSSGTDRGKSRRSHHRRNGSGGDAQPRSNSQ 213


>AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,
           isoform C protein.
          Length = 2061

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 337 KTSEERWSTSSQTC*GQEKGK-RTKTQRAEGVGGTVQTCPNSE 462
           KT    W T  Q+  G ++GK R    R  G GG  Q   NS+
Sbjct: 171 KTDIVEWLTKMQSSSGTDRGKSRRSHHRRNGSGGDAQPRSNSQ 213


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,027,316
Number of Sequences: 53049
Number of extensions: 317040
Number of successful extensions: 644
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)