Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312B04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12701-1|CAA73233.1|  169|Drosophila melanogaster ATP synthase, ...   200   1e-51
AY113454-1|AAM29459.1|  297|Drosophila melanogaster RE35715p pro...   200   1e-51
AE014297-4433|AAN14186.1|  297|Drosophila melanogaster CG7610-PC...   200   1e-51
AE014297-4432|AAF56932.1|  297|Drosophila melanogaster CG7610-PB...   200   1e-51
AE014297-4431|AAN14185.1|  297|Drosophila melanogaster CG7610-PA...   200   1e-51
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA...    29   2.9  
AE013599-3975|AAN16123.1|  381|Drosophila melanogaster CG32836-P...    28   6.7  
Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein...    28   8.8  
BT021955-1|AAX51660.1|  325|Drosophila melanogaster AT25977p pro...    28   8.8  
AY119603-1|AAM50257.1| 1103|Drosophila melanogaster LD27161p pro...    28   8.8  
AE014134-555|ABI31284.1|  945|Drosophila melanogaster CG9660-PE,...    28   8.8  
AE014134-554|AAN10407.2|  984|Drosophila melanogaster CG9660-PD,...    28   8.8  
AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,...    28   8.8  
AE013599-1784|AAF58322.2|  357|Drosophila melanogaster CG16935-P...    28   8.8  

>Y12701-1|CAA73233.1|  169|Drosophila melanogaster ATP synthase,
           gamma subunit protein.
          Length = 169

 Score =  200 bits (487), Expect = 1e-51
 Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
 Frame = +3

Query: 99  AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 278
           A +  Q  R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA 
Sbjct: 16  ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75

Query: 279 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 455
           QF+E+ E+ P E  +PK+L +A+TSDRGLCGAVHTGV+++IR  L++  A N KV CVGD
Sbjct: 76  QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134

Query: 456 KSRGILQRLYGKHIISVANEIG 521
           KSR IL RLYGK+I+ VANE+G
Sbjct: 135 KSRAILSRLYGKNILMVANEVG 156


>AY113454-1|AAM29459.1|  297|Drosophila melanogaster RE35715p
           protein.
          Length = 297

 Score =  200 bits (487), Expect = 1e-51
 Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
 Frame = +3

Query: 99  AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 278
           A +  Q  R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA 
Sbjct: 16  ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75

Query: 279 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 455
           QF+E+ E+ P E  +PK+L +A+TSDRGLCGAVHTGV+++IR  L++  A N KV CVGD
Sbjct: 76  QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134

Query: 456 KSRGILQRLYGKHIISVANEIG 521
           KSR IL RLYGK+I+ VANE+G
Sbjct: 135 KSRAILSRLYGKNILMVANEVG 156


>AE014297-4433|AAN14186.1|  297|Drosophila melanogaster CG7610-PC,
           isoform C protein.
          Length = 297

 Score =  200 bits (487), Expect = 1e-51
 Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
 Frame = +3

Query: 99  AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 278
           A +  Q  R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA 
Sbjct: 16  ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75

Query: 279 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 455
           QF+E+ E+ P E  +PK+L +A+TSDRGLCGAVHTGV+++IR  L++  A N KV CVGD
Sbjct: 76  QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134

Query: 456 KSRGILQRLYGKHIISVANEIG 521
           KSR IL RLYGK+I+ VANE+G
Sbjct: 135 KSRAILSRLYGKNILMVANEVG 156


>AE014297-4432|AAF56932.1|  297|Drosophila melanogaster CG7610-PB,
           isoform B protein.
          Length = 297

 Score =  200 bits (487), Expect = 1e-51
 Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
 Frame = +3

Query: 99  AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 278
           A +  Q  R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA 
Sbjct: 16  ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75

Query: 279 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 455
           QF+E+ E+ P E  +PK+L +A+TSDRGLCGAVHTGV+++IR  L++  A N KV CVGD
Sbjct: 76  QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134

Query: 456 KSRGILQRLYGKHIISVANEIG 521
           KSR IL RLYGK+I+ VANE+G
Sbjct: 135 KSRAILSRLYGKNILMVANEVG 156


>AE014297-4431|AAN14185.1|  297|Drosophila melanogaster CG7610-PA,
           isoform A protein.
          Length = 297

 Score =  200 bits (487), Expect = 1e-51
 Identities = 100/142 (70%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
 Frame = +3

Query: 99  AVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAV 278
           A +  Q  R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAERDLKAARPYG GA 
Sbjct: 16  ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75

Query: 279 QFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGD 455
           QF+E+ E+ P E  +PK+L +A+TSDRGLCGAVHTGV+++IR  L++  A N KV CVGD
Sbjct: 76  QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEA-NTKVFCVGD 134

Query: 456 KSRGILQRLYGKHIISVANEIG 521
           KSR IL RLYGK+I+ VANE+G
Sbjct: 135 KSRAILSRLYGKNILMVANEVG 156


>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
            protein.
          Length = 5106

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 10   SSTGKFYR*TPIKFAKCWDASDRVWAPKSWRW 105
            +S G+F +  P  +   WD  D VW  K+W W
Sbjct: 2990 ASGGQFPQSKPTLYDYFWDVKDNVW--KAWEW 3019


>AE013599-3975|AAN16123.1|  381|Drosophila melanogaster CG32836-PA
           protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 62  GTLRTGCGHPSRGGGLPSAKQEY 130
           GTLR+  GH  RGGG  S+   Y
Sbjct: 86  GTLRSKHGHSGRGGGADSSSGSY 108


>Y14157-1|CAA74574.1| 2176|Drosophila melanogaster Toucan protein
            protein.
          Length = 2176

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 481  NLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGV 302
            NL   P DL P   T   +   S R       TP  T+ HK L+  +A+   + +   GV
Sbjct: 1283 NLSISPTDLGPPPKTQQTTKGQSTRSKSSATPTPTPTSIHKRLNGTLASTAAIATPIKGV 1342

Query: 301  TS 296
             +
Sbjct: 1343 AT 1344


>BT021955-1|AAX51660.1|  325|Drosophila melanogaster AT25977p
           protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 435 KVICVGDKSRGILQRLYGKHIISVANEIG 521
           +VICVGDK +G      G+H+I +A+ +G
Sbjct: 91  EVICVGDKVKGFEA---GQHVIPLASGLG 116


>AY119603-1|AAM50257.1| 1103|Drosophila melanogaster LD27161p
           protein.
          Length = 1103

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 481 NLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGV 302
           NL   P DL P   T   +   S R       TP  T+ HK L+  +A+   + +   GV
Sbjct: 210 NLSISPTDLGPPPKTQQTTKGQSTRSKSSATPTPTPTSIHKRLNGTLASTAAIATPIKGV 269

Query: 301 TS 296
            +
Sbjct: 270 AT 271


>AE014134-555|ABI31284.1|  945|Drosophila melanogaster CG9660-PE,
           isoform E protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 481 NLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGV 302
           NL   P DL P   T   +   S R       TP  T+ HK L+  +A+   + +   GV
Sbjct: 52  NLSISPTDLGPPPKTQQTTKGQSTRSKSSATPTPTPTSIHKRLNGTLASTAAIATPIKGV 111

Query: 301 TS 296
            +
Sbjct: 112 AT 113


>AE014134-554|AAN10407.2|  984|Drosophila melanogaster CG9660-PD,
           isoform D protein.
          Length = 984

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 481 NLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGV 302
           NL   P DL P   T   +   S R       TP  T+ HK L+  +A+   + +   GV
Sbjct: 91  NLSISPTDLGPPPKTQQTTKGQSTRSKSSATPTPTPTSIHKRLNGTLASTAAIATPIKGV 150

Query: 301 TS 296
            +
Sbjct: 151 AT 152


>AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,
            isoform A protein.
          Length = 2162

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 481  NLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGV 302
            NL   P DL P   T   +   S R       TP  T+ HK L+  +A+   + +   GV
Sbjct: 1269 NLSISPTDLGPPPKTQQTTKGQSTRSKSSATPTPTPTSIHKRLNGTLASTAAIATPIKGV 1328

Query: 301  TS 296
             +
Sbjct: 1329 AT 1330


>AE013599-1784|AAF58322.2|  357|Drosophila melanogaster CG16935-PA
           protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 435 KVICVGDKSRGILQRLYGKHIISVANEIG 521
           +VICVGDK +G      G+H+I +A+ +G
Sbjct: 91  EVICVGDKVKGFEA---GQHVIPLASGLG 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,901,561
Number of Sequences: 53049
Number of extensions: 633300
Number of successful extensions: 1881
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)