Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312B02f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 309 9e-85
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 308 1e-84
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 308 1e-84
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 307 4e-84
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 306 6e-84
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 306 6e-84
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 302 1e-82
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 302 1e-82
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 302 1e-82
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 281 2e-76
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 227 3e-60
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 196 6e-51
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 165 1e-41
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 130 4e-31
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 118 2e-27
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 4e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 87 5e-18
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 78 4e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 1e-14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 39 0.002
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.002
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.067
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.47
At1g32190.1 68414.m03959 expressed protein 30 1.1
At3g42723.1 68416.m04459 hypothetical protein 29 1.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.9
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.4
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 5.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.8
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 27 5.8
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 5.8
At4g01535.1 68417.m00199 hypothetical protein 27 5.8
At3g05750.1 68416.m00646 expressed protein 27 5.8
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 27 5.8
At1g10620.1 68414.m01204 protein kinase family protein contains ... 27 5.8
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 5.8
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 7.7
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.7
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 27 7.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 309 bits (758), Expect = 9e-85
Identities = 143/153 (93%), Positives = 148/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 308 bits (757), Expect = 1e-84
Identities = 143/153 (93%), Positives = 147/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 308 bits (757), Expect = 1e-84
Identities = 143/153 (93%), Positives = 147/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 307 bits (753), Expect = 4e-84
Identities = 142/153 (92%), Positives = 147/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 306 bits (751), Expect = 6e-84
Identities = 141/153 (92%), Positives = 146/153 (95%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 306 bits (751), Expect = 6e-84
Identities = 141/153 (92%), Positives = 146/153 (95%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 302 bits (741), Expect = 1e-82
Identities = 136/153 (88%), Positives = 147/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 302 bits (741), Expect = 1e-82
Identities = 136/153 (88%), Positives = 147/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 302 bits (741), Expect = 1e-82
Identities = 136/153 (88%), Positives = 147/153 (96%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 281 bits (690), Expect = 2e-76
Identities = 124/153 (81%), Positives = 143/153 (93%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 240
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 241 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 420
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 421 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDS
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDS 158
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 227 bits (556), Expect = 3e-60
Identities = 104/147 (70%), Positives = 122/147 (82%)
Frame = +1
Query: 76 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 255
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 256 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 435
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 436 NTPAMYVAIQAVLSLYASGRTTGIVLD 516
+ PAMYV++Q+VL LY+SGRTTG+VLD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLD 145
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 196 bits (479), Expect = 6e-51
Identities = 86/112 (76%), Positives = 102/112 (91%)
Frame = +1
Query: 184 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 363
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 364 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDS
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDS 112
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 165 bits (402), Expect = 1e-41
Identities = 74/150 (49%), Positives = 102/150 (68%), Gaps = 2/150 (1%)
Frame = +1
Query: 76 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 249
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 250 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 429
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 430 TFNTPAMYVAIQAVLSLYASGRTTGIVLDS 519
+N +++ IQAVL+LYA G TG+V+DS
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDS 156
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 130 bits (315), Expect = 4e-31
Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 22/174 (12%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 210
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 211 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 354
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 355 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 516
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVD 178
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 118 bits (284), Expect = 2e-27
Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 26/174 (14%)
Frame = +1
Query: 73 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 198
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 199 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 369
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 370 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLD 516
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVD 178
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 4e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 195
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 196 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 372
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 373 EAPLNPKANREK 408
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 87.4 bits (207), Expect = 5e-18
Identities = 60/150 (40%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 73 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 249
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 250 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 426
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 427 ETFNTPAMYVAIQAVLSLYASGRTTGIVLD 516
ETFN Y + QAVLSLYA GR +G +D
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVD 142
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 77.8 bits (183), Expect = 4e-15
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Frame = +1
Query: 76 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 255
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 256 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 417
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 418 IMFETFNTPAMYVAIQAVLSLYASGRTTGI 507
++FET+ PA+ + A S Y + GI
Sbjct: 138 LLFETYGVPAVAFGVDAAFS-YKYNQLHGI 166
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +1
Query: 76 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 255
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 256 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 435
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 436 NTPAMYVA-IQAVLSLYASGRTTGIVL 513
++Y+A Q+++ LY + R +L
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSIL 148
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +1
Query: 319 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 468
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 469 VLSLYASGRTTGIVLD 516
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +1
Query: 319 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 468
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 469 VLSLYASGRTTGIVLD 516
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 197 PMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 60
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 375 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALTVRVRSYHR 503
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 422 CSKHSTRPPCTSPSKPCSHC-TRPVVPPVSCW 514
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At3g42723.1 68416.m04459 hypothetical protein
Length = 806
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 177 GRDGRHGTEGLVRRRRSTEQKRY 245
G D + ++G+V RR+S E+KRY
Sbjct: 130 GSDSQESSDGVVSRRKSWERKRY 152
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 220 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 399
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 400 REK 408
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 220 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 399
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 400 REK 408
REK
Sbjct: 225 REK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 308 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 219
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 359 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTYESF 201
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 173 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 51
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 422 CSKHSTRPPCTSPSKPCSHCTRPVVPPV 505
CS PP P +H T+PV PPV
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPV 142
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 431 HSTRPPCTSPSKPCSHCTRPVVPP 502
+S+ PP SP+ +CTRP PP
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPP 541
>At4g01535.1 68417.m00199 hypothetical protein
Length = 137
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 9 VPTCHLFNNTILIQDVRRGSCRVGSRQWL 95
+ + +L NT +++D + +C GS+ WL
Sbjct: 13 IESLNLLKNTTVLEDQGKWNCEFGSKLWL 41
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 61 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 237
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 238 RG--ILTLKYPIEHGIVTNWDDMEK 306
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 300 HVIPVSDDSVFDGVFEGQDTSFALCFVSYVRVLLSH 193
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 434 STRPPCTSPSKPCSHCTRPVVPPVSCWTP 520
+T+PP TSP P S T+ PP + P
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQP 68
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +1
Query: 286 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 465
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 466 AVLSLYASGRTTGIVL 513
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 369 H*GSPQPQGQQREDDPDHVRN 431
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 286 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 435
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 360 GVFLGGDTQLI-VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCFVSYVR 208
G+ GG ++ + G+M + ++IP+S V G+ Q +FA+ V Y+R
Sbjct: 114 GICTGGILFVLGISGLMQLVFNIIPLS---VVRGIQLSQGLAFAMSAVKYIR 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,831,640
Number of Sequences: 28952
Number of extensions: 303876
Number of successful extensions: 965
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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