Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312A09f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22SU0 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_Q8I3V3 Cluster: Putative uncharacterized protein PFE077...    32   9.2  

>UniRef50_Q22SU0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 923

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +2

Query: 152 VPFTHHAFRILSLVQKCFTIIR-NVSNN*IIKSYIYKSDYVKC 277
           V FTH++  IL + QK FTII  ++ +N I+K ++  +D + C
Sbjct: 671 VRFTHNSEAILCVTQKNFTIIYWSLHDNEIVKKFVGHTDIILC 713


>UniRef50_Q8I3V3 Cluster: Putative uncharacterized protein PFE0775c;
           n=7; Plasmodium|Rep: Putative uncharacterized protein
           PFE0775c - Plasmodium falciparum (isolate 3D7)
          Length = 960

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 367 SFRL*SQSSYLDLLFVSVRNSLKLNLK*EKTFDIIGFIYVGFNYLIITNISNY 209
           +F L S S  +D+LF+S+ +   LN K   T   I   ++  NY+ + N   Y
Sbjct: 658 TFLLLSASKRIDILFLSINDMYPLNSKKHITIVWIVIFFIYINYIFLDNEIRY 710


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,783,597
Number of Sequences: 1657284
Number of extensions: 5836996
Number of successful extensions: 10382
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10382
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)