Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312A08f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    43   6e-04
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    32   1.4  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 43.2 bits (97), Expect = 6e-04
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
 Frame = -1

Query: 260 LVFFV*ITLSVYLFIYFVIYRLFHLLFY---SLYSQIFIVLLHTISI*VYLHA-----IF 105
           +  F+ I + +Y++IY  +Y   ++ FY    +Y  IFI +   + I +Y++      I+
Sbjct: 13  MYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIY 72

Query: 104 YYVHILYSSRI**VLCVSIYYIMCFYVYDRIMKR 3
            Y+HI     I   +C+ +Y  +  ++Y  I  R
Sbjct: 73  IYLHIFIYLHIFIYICICLYIFIYVFIYINIYMR 106



 Score = 31.9 bits (69), Expect = 1.4
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -1

Query: 209 VIYRLFHLLFYSLYSQIFIVLLHTISI*VYLHAIFYYVHILYSSRI**VLCVSIYYIMCF 30
           ++ +L+  ++  +Y  IFI +   I I VY++ I+ Y++    + I   L + IY  +C 
Sbjct: 1   MLEKLYVYIYMFMYIFIFIYIFIYIYIYVYVY-IYLYIYFYIFTYI--YLYIFIYIYICL 57

Query: 29  YVY 21
           Y+Y
Sbjct: 58  YIY 60


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = -1

Query: 242 ITLSVYLFIYFVIYRLFHLLFYSLYSQIFIVLLHTISI*VYLHAIFYYVHILYSSRI**V 63
           I +  Y +I   IY   H   YS Y++I I +       +++HA + Y+++   +RI   
Sbjct: 17  IHIHAYAYICIFIYTHMHTYVYS-YTRICIHMY------IHIHA-YAYIYVYSYTRICIH 68

Query: 62  LCVSIYYIMCFYVYDRI 12
           +C+ IY  M  Y+Y  I
Sbjct: 69  ICIFIYTHMHTYMYIHI 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,561,600
Number of Sequences: 237096
Number of extensions: 660058
Number of successful extensions: 4939
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4928
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)