Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312A08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    31   1.3  
AY094779-1|AAM11132.1|  637|Drosophila melanogaster LD10758p pro...    28   8.8  
AE014296-2612|AAF49554.1|  637|Drosophila melanogaster CG6017-PA...    28   8.8  

>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = -1

Query: 251 FV*ITLSVYLFIYFVIYRLFHLLFYSLYSQIFIVLLHTISI*VYLHAIFYYVHILYSSRI 72
           F+ I LS+YL IY  IY        S+Y  I++ +  +IS+ +YL +I+  +++     I
Sbjct: 18  FIGIYLSIYLSIYLSIY-------LSIYLSIYLCIYLSISLSIYL-SIYLSIYLSIYLSI 69

Query: 71  **VLCVSIY 45
              L +SIY
Sbjct: 70  YLSLYLSIY 78


>AY094779-1|AAM11132.1|  637|Drosophila melanogaster LD10758p
           protein.
          Length = 637

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -1

Query: 269 LFSLVFFV*ITLSVYLFIYFVIYRLFHLLFYSLYSQIFIVLLHTISI*VYLHAIFYYVHI 90
           L  +VF V     +  F+   +Y +FH +  +L+ +  + LL  +S+ +   A FY   +
Sbjct: 309 LAGIVFTVNTLYIIKFFLLGCLYSIFHTIGKALFDEHLMALL-PLSVYLATKAWFYVTWL 367

Query: 89  LY 84
           +Y
Sbjct: 368 MY 369


>AE014296-2612|AAF49554.1|  637|Drosophila melanogaster CG6017-PA
           protein.
          Length = 637

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -1

Query: 269 LFSLVFFV*ITLSVYLFIYFVIYRLFHLLFYSLYSQIFIVLLHTISI*VYLHAIFYYVHI 90
           L  +VF V     +  F+   +Y +FH +  +L+ +  + LL  +S+ +   A FY   +
Sbjct: 309 LAGIVFTVNTLYIIKFFLLGCLYSIFHTIGKALFDEHLMALL-PLSVYLATKAWFYVTWL 367

Query: 89  LY 84
           +Y
Sbjct: 368 MY 369


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,981,744
Number of Sequences: 53049
Number of extensions: 215728
Number of successful extensions: 513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)