Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312A05f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0D1K3 Cluster: Chromosome undetermined scaffold_34, wh...    35   1.3  
UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, wh...    33   4.0  
UniRef50_A7P662 Cluster: Chromosome chr4 scaffold_6, whole genom...    32   9.2  
UniRef50_Q6CKP2 Cluster: Similar to sp|P53100 Saccharomyces cere...    32   9.2  

>UniRef50_A0D1K3 Cluster: Chromosome undetermined scaffold_34, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_34,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1424

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 1   FFFFFEHRQSLINNKYNVDCKQYYSTNKYLIFTKISSYNF*DIS-HLHIEKAVAGDICSL 177
           +  F E    L ++  ++DC QYY   K L+F +  +Y+  D+  HL  E+    DIC L
Sbjct: 275 YLLFIEEVYFLFHDLPHLDCPQYY---KVLLFYQGMNYSLKDLHIHLDFEQLQLSDICLL 331

Query: 178 IIML 189
            + L
Sbjct: 332 KLAL 335


>UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_52, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1841

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 46   YNVDCKQYYSTNKYLIFTKISSY 114
            YN +CK++ S  KY  FT ISSY
Sbjct: 999  YNFECKEFSSQLKYTFFTSISSY 1021


>UniRef50_A7P662 Cluster: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr4 scaffold_6, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 449

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 19  HRQSLINNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHL 138
           H  +  N+K+ + C +Y+  N+Y+ F K   YN  DIS+L
Sbjct: 215 HMVTSFNDKFGLQCDKYFLENRYMFFMK--QYN--DISNL 250


>UniRef50_Q6CKP2 Cluster: Similar to sp|P53100 Saccharomyces
           cerevisiae YGL185c; n=1; Kluyveromyces lactis|Rep:
           Similar to sp|P53100 Saccharomyces cerevisiae YGL185c -
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 424

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 158 LETFVVLLLCSYETRVSNTRLKSPFLSSCKLHIVLCN 268
           LETF  +++C      ++  +   FLS CK  +V+CN
Sbjct: 267 LETFDCIVICLPGNASTHHMINKTFLSRCKFGVVICN 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,019,570
Number of Sequences: 1657284
Number of extensions: 7466421
Number of successful extensions: 17824
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17823
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)