Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312A02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 209 9e-55
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 207 5e-54
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 6e-40
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 4e-39
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 1e-36
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 140 5e-34
SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18) 107 7e-24
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 105 3e-23
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 1e-20
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 53 1e-07
SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34) 33 0.19
SB_21327| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12) 29 3.1
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 28 5.4
SB_14973| Best HMM Match : THAP (HMM E-Value=1.9e-05) 27 7.1
SB_31052| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-14) 27 9.4
SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3) 27 9.4
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 209 bits (511), Expect = 9e-55
Identities = 97/176 (55%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PLTGM + T++QL++DHFLFK+GDRFL AA + WP GRGI+HN KTFLVW NEED L
Sbjct: 157 PLTGMDEVTREQLVNDHFLFKKGDRFLDAAGCNKEWPEGRGIFHNNEKTFLVWVNEEDQL 216
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISM+MG D+ V+ RL AVNE++KK+ F H G+LT CPTNLGT +RASVH+
Sbjct: 217 RIISMEMGSDIGSVFSRLCRAVNELDKKLGFQHTKSHGYLTSCPTNLGTGMRASVHV-KI 275
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEG---GVYDISHKRRMGLTEYDAVXE 519
+++ K+H+Q RG GEH+E+ G GVYDIS+KRR+GL+E V +
Sbjct: 276 PHAKDHPEFDKICEKFHIQARGIHGEHSESTGEDAGVYDISNKRRLGLSEVQCVQD 331
Score = 206 bits (503), Expect = 9e-54
Identities = 94/176 (53%), Positives = 126/176 (71%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PLTGM + T+Q+L+DDHFLFK+GDRFL+AA + WP GRGI+HN +KTFLVW NEED L
Sbjct: 536 PLTGMDEATRQKLVDDHFLFKKGDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWINEEDQL 595
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISM+ G D+ V+ RL AVNE++KK+ F H D G+L+ CPTNLGT +RASVH+
Sbjct: 596 RIISMEKGSDIGSVFSRLCRAVNELDKKLGFQHTDAHGYLSGCPTNLGTGMRASVHV-KI 654
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEG---GVYDISHKRRMGLTEYDAVXE 519
+++ ++H+Q RG GEH+ + G GV+DIS+KRR+GL+E V +
Sbjct: 655 PKASEHPDFQKICDEFHIQARGIHGEHSVSTGEDAGVFDISNKRRLGLSEVQCVQD 710
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 207 bits (505), Expect = 5e-54
Identities = 94/176 (53%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PL+GM + T+QQL+DDHFLFK+GDRFL+AA + WP GRGI+HN +KTFLVW NEED L
Sbjct: 781 PLSGMDEATRQQLVDDHFLFKKGDRFLEAAGVNKMWPEGRGIFHNNDKTFLVWVNEEDQL 840
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISM+MG D+ V+ RL AVNEI+K++ F+H + G+L+ CPTNLGT +RASVH+
Sbjct: 841 RIISMEMGSDIGSVFSRLCRAVNEIDKQLGFAHKETHGYLSGCPTNLGTGMRASVHV-KI 899
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEG---GVYDISHKRRMGLTEYDAVXE 519
+++ ++H+Q RG GEH+ + G GV+DIS+KRR+GL+E V +
Sbjct: 900 PKASEHPDFQKICDEFHIQARGIHGEHSVSTGEDAGVFDISNKRRLGLSEVQCVQD 955
Score = 196 bits (478), Expect = 9e-51
Identities = 91/172 (52%), Positives = 122/172 (70%), Gaps = 3/172 (1%)
Frame = +1
Query: 13 MSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 192
M + T+QQL+DDHFLFK+GDRFL+AA R WP GRGI+HN +KTFLVW NEED LRIIS
Sbjct: 1 MDEATRQQLVDDHFLFKKGDRFLEAAGVNREWPEGRGIFHNNDKTFLVWVNEEDQLRIIS 60
Query: 193 MQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXX 372
M+MG D+ V++RL +AVNE++ K+ F G+L+ CPTNLGT +RASVH+
Sbjct: 61 MEMGSDIGSVFRRLCTAVNELDNKLGFQQLPGHGYLSSCPTNLGTGMRASVHV-KIPHAS 119
Query: 373 XXXXXEEVASKYHLQVRGTRGEH---TEAEGGVYDISHKRRMGLTEYDAVXE 519
+++ ++H+Q RG GEH T A+ GV+DIS+KRR+GL+E V +
Sbjct: 120 AHPDFQKICDEFHIQARGIHGEHSVSTGADAGVFDISNKRRLGLSEVQCVQD 171
Score = 176 bits (428), Expect = 1e-44
Identities = 81/154 (52%), Positives = 109/154 (70%), Gaps = 3/154 (1%)
Frame = +1
Query: 67 GDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAV 246
GDRFL+AA + WP GRGI+HN +KTFLVW NEED LRIISM+MG D+ V+KRL +AV
Sbjct: 451 GDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWVNEEDQLRIISMEMGSDIGSVFKRLCTAV 510
Query: 247 NEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXXEEVASKYHLQVRG 426
NEI+K++ F H + G+L+ CPTNLGT +RASVH+ +++ ++H+Q RG
Sbjct: 511 NEIDKQLGFQHTEEHGYLSSCPTNLGTGMRASVHV-KIPHASAHPDFQKICDEFHIQARG 569
Query: 427 TRGEH---TEAEGGVYDISHKRRMGLTEYDAVXE 519
GEH T A+ GV+DIS+KRR+GL+E V +
Sbjct: 570 IHGEHSVSTGADAGVFDISNKRRLGLSEVQCVQD 603
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKE 66
PL GM++ET+QQL++DHFLFK+
Sbjct: 349 PLDGMTEETRQQLVNDHFLFKK 370
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 160 bits (389), Expect = 6e-40
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDH 177
PL M+ E Q+QLI+DHFLF K L A R WP RGI+HNENK FLVW NEEDH
Sbjct: 2467 PLNKMTDEEQEQLINDHFLFDKPVSPLLTCAGMARDWPDARGIWHNENKNFLVWVNEEDH 2526
Query: 178 LRIISMQMGGDLQQVYKRLVSAVNEIEKKI-----PFSHHDRLGFLTFCPTNLGTTVRAS 342
R+ISM+ GGD++ V+ R + +N++E I F ++ LG++ CP+NLGT +RA
Sbjct: 2527 TRVISMEKGGDMRAVFTRFCNGLNKVESLIKEAGYEFMWNEHLGYVLTCPSNLGTGLRAG 2586
Query: 343 VHIXXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAV 513
VH+ + + +K LQ RGT G T + GGVYDIS+ R+G +E + V
Sbjct: 2587 VHLKIPLLSQDEKRLDAILAKLKLQKRGTGGVDTASVGGVYDISNADRIGFSEVELV 2643
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 157 bits (382), Expect = 4e-39
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 6/177 (3%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDH 177
PL GMS QQQLIDDHFLF K L A R WP RGI+HN++K FL+W NEEDH
Sbjct: 207 PLNGMSDAQQQQLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNDSKNFLIWVNEEDH 266
Query: 178 LRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHD-----RLGFLTFCPTNLGTTVRAS 342
R+ISMQ GGD++ V+ R +N++E I H+ LG++ CP+NLGT +RA
Sbjct: 267 TRVISMQQGGDMRSVFDRFCRGLNQVEGLIKKKGHEFMWNQHLGYILTCPSNLGTGLRAG 326
Query: 343 VHIXXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAV 513
VH+ + + K LQ RGT G T A GG +DIS+ R+G +E + V
Sbjct: 327 VHV-KLPNLGKDKRLDTILDKLRLQKRGTGGVDTAAVGGTFDISNSDRLGYSEVELV 382
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 149 bits (361), Expect = 1e-36
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDH 177
PL+ M+ Q QLIDDHFLF K L A+ R WP RGI+HN+NKTFLVW NEEDH
Sbjct: 146 PLSNMTAAEQDQLIDDHFLFDKPVSPLLLASRMARDWPDARGIWHNDNKTFLVWVNEEDH 205
Query: 178 LRIISMQMGGDLQQVYKRLVSAVNEIEKKI-----PFSHHDRLGFLTFCPTNLGTTVRAS 342
R+ISMQ GG++++V+ R + +N++EK I F + LG++ CP+NLGT +R
Sbjct: 206 TRVISMQKGGNMKEVFTRFCNGLNKVEKAIKSKGREFMWNKHLGYVLTCPSNLGTGLRGG 265
Query: 343 VHIXXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAV 513
VH+ + + LQ RGT G T + G +DIS+ R+G +E + V
Sbjct: 266 VHV-KLPLLSKEPRFDSILRTLRLQKRGTGGVDTASTDGTFDISNLDRLGTSEVEQV 321
Score = 144 bits (349), Expect = 4e-35
Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
Frame = +1
Query: 4 LTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
L M++ Q QLIDDHFLF K L A+ R WP RGI+HN+NKTFLVW NEEDH
Sbjct: 516 LMTMTEAEQDQLIDDHFLFDKPVSPLLLASRMARDWPDARGIWHNDNKTFLVWVNEEDHT 575
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIE-----KKIPFSHHDRLGFLTFCPTNLGTTVRASV 345
R+ISMQ GG++++V+ R + +N++E K F ++ LG++ CP+NLGT +R V
Sbjct: 576 RVISMQKGGNMKEVFARFCNGLNKVESLIKSKGYEFMWNEHLGYVLTCPSNLGTGLRGGV 635
Query: 346 HIXXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAV 513
H+ + + LQ RGT G T + G +DIS+ R+G +E + V
Sbjct: 636 HV-KLPLLSARDDFDSLLKALRLQKRGTGGVDTASTDGTFDISNADRLGTSEVEQV 690
Score = 138 bits (335), Expect = 2e-33
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 6/177 (3%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDH 177
PL+ M+ Q+QLI+DHFLF K L +A R WP RGI+HN+ K FLVW NEEDH
Sbjct: 912 PLSKMTDAEQEQLINDHFLFDKPVSPLLLSARMARDWPDARGIWHNDAKNFLVWVNEEDH 971
Query: 178 LRIISMQMGGDLQQVYKRLVSAVNEIE-----KKIPFSHHDRLGFLTFCPTNLGTTVRAS 342
R+ISMQ GG++++V+ R + + +IE K F + LG++ CP+NLGT +R
Sbjct: 972 TRVISMQQGGNMREVFHRFCNGLKKIEDAMKAKGKEFMWDEHLGYVLTCPSNLGTGLRGG 1031
Query: 343 VHIXXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAV 513
VH+ + + K LQ RGT G T + G +DIS+ R+G +E V
Sbjct: 1032 VHV-KLPMVSKDARFDGILEKLRLQKRGTGGVDTASTDGTFDISNLDRIGFSEVQLV 1087
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 140 bits (340), Expect = 5e-34
Identities = 76/181 (41%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Frame = +1
Query: 7 TGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRI 186
T M+ E +Q+L+DDHFLF+ D+ A+ FWP GRGI+ N+ KTFL W NE DHLRI
Sbjct: 108 TTMTDEERQKLVDDHFLFRGKDKMQAASGYHEFWPEGRGIFINKAKTFLNWINEGDHLRI 167
Query: 187 ISMQMGGDLQQVYKRLVSAVNEIE--------KKIPFSHHDRLGFLTFCPTNLGTTVRAS 342
ISM+MGGD++ V+ RL IE K F H G +T CPTN+GT +R S
Sbjct: 168 ISMEMGGDVKGVFTRLSRGAKAIEDGVKEATGAKDAFMMHPTFGSVTCCPTNIGTGMRGS 227
Query: 343 VHI--XXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVX 516
VHI +++ + + Q RG+ GEH+E + D+S+ RR+G EY V
Sbjct: 228 VHILVPKLIAKIGFDAIDKICRERNCQARGSTGEHSEVIDRI-DVSNWRRIGFPEYQLVD 286
Query: 517 E 519
+
Sbjct: 287 D 287
>SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)
Length = 138
Score = 107 bits (256), Expect = 7e-24
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Frame = +1
Query: 4 LTGMSKETQQQLIDDHFLFKEGDR-FLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
L+ M+ + L +H L + ++ R WP GRG++H ++K+FL+W NEEDHL
Sbjct: 10 LSSMTPQDYHHLSLEHVLSDATKHPLIVSSGMSRDWPDGRGVWHTKDKSFLIWVNEEDHL 69
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKI-----PFSHHDRLGFLTFCPTNLGTTVRASV 345
R+ISM+ GGDL++ Y+R + E+E +I F + LG++ CP+NLGT +RASV
Sbjct: 70 RVISMETGGDLERTYERFYRGLKELESRIQKFGHEFMRNRHLGYINTCPSNLGTGLRASV 129
Query: 346 HI 351
H+
Sbjct: 130 HV 131
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 105 bits (251), Expect = 3e-23
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Frame = +1
Query: 7 TGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRI 186
T M+ E +Q+L+DDHFLF+ ++ N+ KTFL W NE DHLRI
Sbjct: 200 TTMTDEERQKLVDDHFLFRSR------------------VFINKAKTFLNWINEGDHLRI 241
Query: 187 ISMQMGGDLQQVYKRLVSAVNEIE--------KKIPFSHHDRLGFLTFCPTNLGTTVRAS 342
ISM+MGGD++ V+ RL IE K F H G +T CPTN+GT +R S
Sbjct: 242 ISMEMGGDVKGVFTRLSRGAKAIEDGVKEATGAKDAFMMHPTFGSVTCCPTNIGTGMRGS 301
Query: 343 VHI--XXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVX 516
VHI +++ + + Q RG+ GEH+E + D+S+ RR+G EY V
Sbjct: 302 VHILVPKLIAKIGFDAIDKICRERNCQARGSTGEHSEVIDRI-DVSNWRRIGFPEYQLVD 360
Query: 517 E 519
+
Sbjct: 361 D 361
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDH 177
PL M+ E Q+QLI+DHFLF K L A R WP RGI+HN+NK FLVW NEEDH
Sbjct: 548 PLGKMTNEEQEQLINDHFLFDKPVSPLLTCAGMARDWPDARGIWHNKNKNFLVWVNEEDH 607
Query: 178 LRIISMQMGGDLQQVYK 228
R+ISMQ GGD++ V++
Sbjct: 608 TRLISMQKGGDMRAVFE 624
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Frame = +1
Query: 4 LTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLR 183
L +S +++ LI H +F+ Q + W +GRGI+ + + NE +H+
Sbjct: 338 LARISSKSRDTLITKHGIFRN-----QKLDCDDTWSSGRGIWRDGTSNAIALVNEREHII 392
Query: 184 IISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRL-----GFLTFCPTNLGTTVRASVH 348
++ + GGDL + R+ V E + + H + GFL P +GT +R SV+
Sbjct: 393 FLTQEFGGDLCHAFYRMRDLVERTELALEKTGHKYMHSVVYGFLVSSPQEVGTGLRISVN 452
Query: 349 I 351
+
Sbjct: 453 V 453
>SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34)
Length = 394
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 195 ADGRRPAAGVQEAGERRQRDREEDPVLAPRPARLP 299
AD RPA G +E +R +RD++ED RPAR P
Sbjct: 258 ADQERPARGPRETSKRTKRDQQED---QERPARGP 289
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 192 DADGRRPAAGVQEAGERRQRDREEDPVLAPRPARLP 299
+ D RPA G ++ +R +RD++ED RPAR P
Sbjct: 117 EEDQERPAGGPRKTSKRTKRDQQED---QERPARGP 149
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 198 DGRRPAAGVQEAGERRQRDREED---PVLAPRPAR 293
D RPA G +E +R +RD++ED P PR R
Sbjct: 75 DQERPARGPRETSKRTKRDQQEDQERPAGRPRKTR 109
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 195 ADGRRPAAGVQEAGERRQRDREED 266
AD RPA G++E +R +RD+ D
Sbjct: 162 ADQERPARGLKETSKRTKRDQHAD 185
>SB_21327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 184 IISMQMGGDLQQVYKRLVSAVNEIEKKIP-----FSHHDRLGFLTFCPTNLGTTVRASVH 348
+I G DL Y R ++++E+++ F+ D LG++ P +LGT + +
Sbjct: 1 VICWSQGSDLFDTYDRFQRGLSQLEEELKQNDEEFALSDHLGYIVSDPRHLGTAMEVRMR 60
Query: 349 I 351
+
Sbjct: 61 V 61
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 219 GVQEAGERRQRDREEDPVLAPRPARLPHVLPDQ---PGHHGPRL 341
GV E +R R P L P P ++P +LP Q PG G +L
Sbjct: 2338 GVMEVSHQRFALRHPAPGLPPPPQQVPGILPGQVPLPGVDGQQL 2381
>SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12)
Length = 630
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 225 QEAGERRQRDREEDPVLAPRPARLPHVLPDQPGH 326
+++GE+ +RD ++P+ P +++P V GH
Sbjct: 189 RKSGEKMERDNNDNPMPPPTSSKMPRVNSMNVGH 222
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 235 VSAVNEIEKKIPFSHHDRLGFLTFCPTNLGT 327
VSA + +E K+PFS H TFC T+ +
Sbjct: 84 VSAKSNLEIKVPFSFHHPYICPTFCRTSFAS 114
>SB_14973| Best HMM Match : THAP (HMM E-Value=1.9e-05)
Length = 317
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 107 QKRQALAACRK-RSPSLNRKWSSMSCCWVSF-DMP 9
+K Q ++ R + PSL RKW+ + C V F D+P
Sbjct: 14 RKTQGISFHRSPQEPSLRRKWAEIVACRVHFADLP 48
>SB_31052| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-14)
Length = 283
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 275 ENGIFFSISLTALTSLLYTCCRSPPICIEMM 183
+ ++F I+L A+T L+ +P +CIE+M
Sbjct: 48 KKSVYFVINL-AITDFLFGAAYAPVVCIELM 77
>SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 333
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +3
Query: 3 PHRHVEGDPAAAH---RRPLPVQGGRP 74
PH H EG P AH R P V G P
Sbjct: 208 PHVHTEGSPTTAHARSREPQSVNGFSP 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,643,326
Number of Sequences: 59808
Number of extensions: 186009
Number of successful extensions: 973
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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