Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS312A02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 247 3e-66
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 247 3e-66
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 237 5e-63
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 235 1e-62
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 235 1e-62
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 234 3e-62
U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical p... 57 7e-09
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 0.87
Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 6.2
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 247 bits (605), Expect = 3e-66
Identities = 113/173 (65%), Positives = 134/173 (77%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN KTFL+WCNEEDHL
Sbjct: 173 PLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFLIWCNEEDHL 232
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISMQ GG++ QV +RL+ V IEK+ PFS DRLG+LTFCP+NLGTTVRASVHI
Sbjct: 233 RIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSNLGTTVRASVHI-RL 291
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVXE 519
+ + LQ+RG GEH+E+EGGVYDIS+K R+GLTE++AV +
Sbjct: 292 PKISAKPDFKSICDGLKLQIRGIHGEHSESEGGVYDISNKARLGLTEFEAVKQ 344
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 247 bits (605), Expect = 3e-66
Identities = 113/173 (65%), Positives = 134/173 (77%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN KTFL+WCNEEDHL
Sbjct: 210 PLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNNQKTFLIWCNEEDHL 269
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISMQ GG++ QV +RL+ V IEK+ PFS DRLG+LTFCP+NLGTTVRASVHI
Sbjct: 270 RIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSNLGTTVRASVHI-RL 328
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVXE 519
+ + LQ+RG GEH+E+EGGVYDIS+K R+GLTE++AV +
Sbjct: 329 PKISAKPDFKSICDGLKLQIRGIHGEHSESEGGVYDISNKARLGLTEFEAVKQ 381
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 237 bits (579), Expect = 5e-63
Identities = 110/173 (63%), Positives = 130/173 (75%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PL GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN +KTFL+W NEEDH+
Sbjct: 212 PLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFLIWVNEEDHM 271
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTNLG+TVRASVHI
Sbjct: 272 RIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALP 331
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVXE 519
E+ K +LQVRG GEH+E+ GGVYDIS+K R+GL+EY AV +
Sbjct: 332 KLAARKDFI-EICEKLNLQVRGIHGEHSESVGGVYDISNKARLGLSEYQAVKQ 383
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 235 bits (576), Expect = 1e-62
Identities = 109/171 (63%), Positives = 130/171 (76%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PL GMSK+TQ QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN KTFL+W NEEDHL
Sbjct: 185 PLDGMSKDTQNQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNKKTFLIWVNEEDHL 244
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISMQ G D+ V +RL+ V IEK++ FS DRLG+LTFCPTNLG+TVRASVHI
Sbjct: 245 RIISMQEGSDVGAVLERLIKGVRGIEKQVQFSRDDRLGWLTFCPTNLGSTVRASVHI-AL 303
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAV 513
+++ K LQ+RG GEH+E+EGGVYDIS++ R+GL+EY+AV
Sbjct: 304 PKLSAREDFKQICDKLDLQLRGIHGEHSESEGGVYDISNRARLGLSEYEAV 354
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 235 bits (576), Expect = 1e-62
Identities = 109/173 (63%), Positives = 130/173 (75%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PL GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN +KTFL+W NEEDH+
Sbjct: 240 PLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNNDKTFLIWVNEEDHM 299
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTNLG+TVRASVHI
Sbjct: 300 RIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALP 359
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVXE 519
E+ K +LQVRG GEH+++ GGVYDIS+K R+GL+EY AV +
Sbjct: 360 KLAARKDFI-EICEKLNLQVRGIHGEHSDSVGGVYDISNKARLGLSEYQAVKQ 411
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 234 bits (572), Expect = 3e-62
Identities = 107/173 (61%), Positives = 134/173 (77%)
Frame = +1
Query: 1 PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
PLTGM +ET+++LI DHFLFKEGDRFL+AANA R+WP GRGI+HNE KTFLVW NEEDHL
Sbjct: 173 PLTGMDEETKKKLIADHFLFKEGDRFLKAANANRYWPNGRGIFHNEKKTFLVWVNEEDHL 232
Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
RIISMQ GG++ +V RL+ +N + K PF+ H RLG+LTFCPTNLGTTVRASVHI
Sbjct: 233 RIISMQNGGNVGEVLARLIKGLNLVAAKAPFARHPRLGWLTFCPTNLGTTVRASVHI-KL 291
Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVXE 519
+++ S LQ+RG GEH+E++ G+YDIS+K+R+GLTEY AV +
Sbjct: 292 PKISAKDDFKKICSDMKLQIRGIHGEHSESKEGIYDISNKQRLGLTEYQAVRQ 344
>U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical
protein F11G11.13 protein.
Length = 106
Score = 57.2 bits (132), Expect = 7e-09
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +1
Query: 325 TTVRASVHIXXXXXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEY 504
T++++SVHI +++ S+ LQ+RG GE+++ + G+YDIS+K+R+GLTEY
Sbjct: 24 TSLKSSVHIKLPKISAKDDF-KKICSEMKLQIRGIHGEYSDLKEGIYDISNKQRLGLTEY 82
Query: 505 DAVXE 519
AV +
Sbjct: 83 QAVRQ 87
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 201 GRRP---AAGVQEAGERRQRDREEDPVLAPRPARLPHVLPDQ 317
GR P AG E E++ + E DP PRP P P+Q
Sbjct: 271 GRAPNTLKAGDHERKEKKPKKEERDPAAPPRPRGRPPKTPEQ 312
>Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 268 PFSHHDRLGFLTFCPTNLGTTVRASVH 348
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 268 PFSHHDRLGFLTFCPTNLGTTVRASVH 348
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 211 LQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTN--LGTT 330
L ++ + + E++ P HDR L FCP N +GTT
Sbjct: 1058 LNEIELKEKGCILEVDLDYPVELHDRHNDLPFCPENKLVGTT 1099
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,611,603
Number of Sequences: 27780
Number of extensions: 136562
Number of successful extensions: 543
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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