Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS312A02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   311   3e-87
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   104   6e-25
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.5  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   4.4  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  311 bits (763), Expect = 3e-87
 Identities = 142/173 (82%), Positives = 155/173 (89%)
 Frame = +1

Query: 1   PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHL 180
           PLTGMSKETQQ+LIDDHFLFKEGDRFLQAANACRFWPTGRGIYHN++KTFLVWCNEEDHL
Sbjct: 168 PLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNDDKTFLVWCNEEDHL 227

Query: 181 RIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXX 360
           RIISMQMGGDL QVY+RLV AVNEIEK++ FSH+DRLGFLTFCPTNLGTTVRASVHI   
Sbjct: 228 RIISMQMGGDLGQVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCPTNLGTTVRASVHIKLP 287

Query: 361 XXXXXXXXXEEVASKYHLQVRGTRGEHTEAEGGVYDISHKRRMGLTEYDAVXE 519
                    EE+A K++LQVRGTRGEHTEAEGG+YDIS+KRR+GLTEY AV E
Sbjct: 288 KLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKRRLGLTEYQAVKE 340


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  104 bits (249), Expect = 6e-25
 Identities = 45/49 (91%), Positives = 48/49 (97%)
 Frame = +1

Query: 1   PLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKT 147
           PLTGMSKETQQ+LIDDHFLFKEGDRFLQAANA RFWPTGRGIYHN++KT
Sbjct: 152 PLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHNDDKT 200


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 110 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 24
           G K   ++AC     P + +K    +CCWV
Sbjct: 440 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 469


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 110 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 24
           G K   ++AC     P + +K    +CCWV
Sbjct: 530 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 559


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 103 FWPTGRGIYHNENKTFLVWCNEEDHLRIISMQM 201
           F+  GRGI + + K   V  +++ H++I    M
Sbjct: 99  FFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,978
Number of Sequences: 438
Number of extensions: 1737
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)