Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311H04f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 96 2e-20
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.020
SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21) 34 0.062
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 32 0.25
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 32 0.33
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 31 0.44
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 31 0.44
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 31 0.58
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 0.58
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 1.3
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 30 1.3
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 30 1.3
SB_38386| Best HMM Match : PALP (HMM E-Value=4.1e-10) 30 1.3
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 30 1.3
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 1.8
SB_17850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 1.8
SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69) 29 1.8
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 29 1.8
SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 29 2.3
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 29 2.3
SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3) 29 3.1
SB_52335| Best HMM Match : FF (HMM E-Value=9.2) 29 3.1
SB_24167| Best HMM Match : FF (HMM E-Value=9.2) 29 3.1
SB_18429| Best HMM Match : FF (HMM E-Value=9.2) 29 3.1
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 28 4.1
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 28 4.1
SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 28 5.4
SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28) 28 5.4
SB_54391| Best HMM Match : MarR (HMM E-Value=0.95) 27 7.1
SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18) 27 7.1
SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_31270| Best HMM Match : rve (HMM E-Value=0.0043) 27 7.1
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 27 7.1
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 27 7.1
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 27 7.1
SB_130| Best HMM Match : rve (HMM E-Value=0.0043) 27 7.1
SB_53645| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_36993| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 27 9.4
SB_759| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 27 9.4
SB_6454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 95.9 bits (228), Expect = 2e-20
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Frame = +2
Query: 101 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNP 280
+++++ F S L+ V+T EK LP+ + +A EK + + F G+E F ++LKH ET EKNP
Sbjct: 451 RAEVKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNP 509
Query: 281 LPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGI 454
LPD + AE + L D V FD +++KH T+EK + ++ +
Sbjct: 510 LPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSR--AEV 567
Query: 455 ENFDPTKLKHTETCEKNPLPT 517
++FD +KLKH T EKNPLPT
Sbjct: 568 KSFDHSKLKHVVTQEKNPLPT 588
Score = 95.9 bits (228), Expect = 2e-20
Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Frame = +2
Query: 77 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKH 256
+PK D +S++ F+ + L+ V T EK ++PS ED+ E ++ FD S+LKH
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKH 653
Query: 257 TETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXX 430
ET EKNPLP V+ E + L D V FD +++KH +EKNPL
Sbjct: 654 VETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTEST 713
Query: 431 XNKFLNGIENFDPTKLKHTETCEKNPLP 514
+ ++ FD +KLKH +T EKNPLP
Sbjct: 714 ETR--AEVKTFDHSKLKHVQTEEKNPLP 739
Score = 90.2 bits (214), Expect = 9e-19
Identities = 57/143 (39%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +2
Query: 104 SQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTETQEKN 277
S++ F+ + L+ V T EK LPS E + E D E F+ S+L+H ET+EKN
Sbjct: 412 SEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKN 471
Query: 278 PLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIE 457
LP KD +A EK GVE F K ++KH T EKNPL + E
Sbjct: 472 TLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSE 530
Query: 458 --NFDPTKLKHTETCEKNPLPTK 520
FD +KLKH ET EK +PTK
Sbjct: 531 VAKFDTSKLKHVETKEKVVMPTK 553
Score = 86.2 bits (204), Expect = 1e-17
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Frame = +2
Query: 89 ATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIE--KFDSSQLKHTE 262
A D +++++ F+ S L+ V T EK LP+ + + E K+ D E FD ++LKH
Sbjct: 560 AIDSRAEVKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVT 619
Query: 263 TQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKF 442
TQEK+ +P ++ + E V+ FD +++KH T EKNPL
Sbjct: 620 TQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVL 677
Query: 443 --LNGIENFDPTKLKHTETCEKNPLPTK 520
++ + +FD +KLKH E EKNPLPTK
Sbjct: 678 PDVSAVASFDASKLKHVEVQEKNPLPTK 705
Score = 78.2 bits (184), Expect = 4e-15
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Frame = +2
Query: 146 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 325
DT ++I P +E + K + KFD++ LKH +T+EKN LP + + E
Sbjct: 389 DTPQQI-WPGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDE 447
Query: 326 LLD--GVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLKHTETCE 499
D V+ F+K++++H T+EKN L F +G+E F KLKH ET E
Sbjct: 448 FPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLE 506
Query: 500 KNPLP 514
KNPLP
Sbjct: 507 KNPLP 511
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +2
Query: 80 PKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHT 259
P+V D+ S + F+ S L+ V+ EK LP+ +D+ TE T+ ++ FD S+LKH
Sbjct: 674 PEVLPDV-SAVASFDASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHV 730
Query: 260 ETQEKNPLPDKDVVAAEKA 316
+T+EKNPLPD +A EKA
Sbjct: 731 QTEEKNPLPDAKTIAQEKA 749
Score = 47.6 bits (108), Expect = 6e-06
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 284 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIE-- 457
P +V + + + V FD +KH T+EKN L ++F + E
Sbjct: 396 PGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVK 455
Query: 458 NFDPTKLKHTETCEKNPLPTK 520
+F+ +KL+H ET EKN LPTK
Sbjct: 456 SFEKSKLQHVETKEKNTLPTK 476
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 220
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_11031| Best HMM Match : VPS9 (HMM E-Value=8.3e-21)
Length = 900
Score = 34.3 bits (75), Expect = 0.062
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 DVDTNEKIVLPSAEDVATEKTQKSLFDG-IEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 316
DV + P+ A EKT K + DG +EK+ + +T + L D DV E+
Sbjct: 341 DVIGKPPAIPPAQVQAAEEKTPKDIIDGLLEKYKEIGSQMADTSADDGLDDDDV---EEE 397
Query: 317 HQNLLDGVEHFDKTQMK 367
++LD + F T+ K
Sbjct: 398 DDDVLDEADRFRDTKRK 414
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/88 (30%), Positives = 35/88 (39%)
Frame = +1
Query: 196 EDPEVFIRRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHD 375
E PE F RR R+ RD G P+ R + +P G R R + D D
Sbjct: 602 ERPEEFPRRGRDEPEFVRPRGRDDGGRPSREPPRDQHRRPYDDPEGLERESRGERDVRRD 661
Query: 376 DGRKESTAPDRSYRSGEGKEQIPERHRE 459
D R E P S G + + P+R E
Sbjct: 662 DPR-EDRRPGMSEGRGRDRPERPDRTGE 688
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +1
Query: 244 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 423
P+ RDS E S + + SPP SR S + DD R R R
Sbjct: 51 PSSLGRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPSRRSSDD-RSTDARDRRDRRRS 109
Query: 424 EGKEQIPERHRE 459
+E+ P R R+
Sbjct: 110 SSRERRPPRDRD 121
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 31.9 bits (69), Expect = 0.33
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +2
Query: 68 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQ 247
L DL +V +LKS+ EG CL D++ + DV E I + + +
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKEHENLKSAVSISEGELLK 1183
Query: 248 LKHTETQEKNPLPDK 292
K+T EK K
Sbjct: 1184 FKNTLQSEKEEFEKK 1198
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +2
Query: 134 LRDVDTNEKIVLPSAEDV---ATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVA 304
+ D+ NE+ + P ED+ ++ ++L DG++K K ++ Q + L D ++++
Sbjct: 663 VEDISENEEDIDPGKEDIDYDGDDEVNRAL-DGLQKSTFHYNKTSDKQAISSLKDPNLIS 721
Query: 305 AEKAHQNLLDGV 340
+ A ++L+D V
Sbjct: 722 SITAAKDLMDNV 733
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = +1
Query: 301 RSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGE----GKEQIPERHRELRS 468
R+GE E QD + D R E RSG+ +E+ E+ R R
Sbjct: 119 RNGEGDREKRKERSDRNQDYERKDRDRRHEKNGESSRIRSGDREKSDREKEREKERRRRR 178
Query: 469 H*AEAHGDVRKE 504
H E GD R+E
Sbjct: 179 HEDEGSGDRRRE 190
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/71 (16%), Positives = 35/71 (49%)
Frame = +1
Query: 259 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 438
++ G+ + +++ R E P + L + ++ D+ + +E PD+ + +++
Sbjct: 829 QEQGKPDKNKEKQDREQEKPDKDLEKQYQKQEKPDKGQEKQDREQEKPDKDQEKQDREQE 888
Query: 439 IPERHRELRSH 471
P++ +E + H
Sbjct: 889 KPDKDQEKQDH 899
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Frame = +2
Query: 170 PSAEDV--ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAE 310
PS+E A T L DG+ D ++ +H + T E++P +K A
Sbjct: 120 PSSEKSYQALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPSSEKSYQALR 179
Query: 311 KAHQNLLDGVEHFDKTQMKH 370
+LLDG++HF + + +H
Sbjct: 180 DTTHDLLDGLQHFGQAKEEH 199
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +2
Query: 188 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 334
A T L DG+ D ++ +H + T E++P DK A +LLD
Sbjct: 226 ALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALRDTTHDLLD 285
Query: 335 GVEHFDKTQMKH 370
G+ FD+ + +H
Sbjct: 286 GLRDFDQAKEEH 297
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 176 AEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLL 331
++D EKT+ S+ + + DSS T+EK +KD E+ ++L+
Sbjct: 1546 SDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLERWEESLM 1597
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 31.1 bits (67), Expect = 0.58
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +1
Query: 244 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 423
P+ RDS E S + + SPP SR S + DD R R R
Sbjct: 51 PSSLGRDSSERRPSVRVSSDNSRSPPHRRDSSRRSHSPSRRSSDD-RSTDARDRRDRRRS 109
Query: 424 EGKEQIPERHRE 459
+E+ P R R+
Sbjct: 110 SSRERRPPRDRD 121
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 47 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 193
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 167 LPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLP 286
L S D EKT D +E+F S +H T +KNPLP
Sbjct: 194 LSSRSDHVQEKT-----DRLEQFSSQTGRHINTTKKNPLP 228
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 197 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 370
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 549 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 13/80 (16%)
Frame = +2
Query: 170 PSAEDV--ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAE 310
PS+E A T L DG+ FD + +H + E++P +K A
Sbjct: 573 PSSEKSYQALRDTTHDLLDGLRYFDQASKEHAKLIPKYHEILIKKIEQDPSSEKRYQALR 632
Query: 311 KAHQNLLDGVEHFDKTQMKH 370
NL DG+ FD + +H
Sbjct: 633 DTTYNLFDGLRDFDHAKEEH 652
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 1 SIPFLIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 129
S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 226 SLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_38386| Best HMM Match : PALP (HMM E-Value=4.1e-10)
Length = 736
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQD------SDEAHDDGRKESTA- 399
+P +DS + ++ ++R S P+ LG +R + S+E ++ +++S+A
Sbjct: 80 KPHRKPQDSESKASTSKKRMTRANSAPKTLGHNRLSLEKHHQEKISEEPLEEPQRKSSAN 139
Query: 400 -----PDRSYRSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHK 519
P + + G+ K+ + R L S+ A+ D+R+ P P K
Sbjct: 140 LLSPKPWLTNKRGD-KDGLLRRRASLPSNVGHAYHDLRRSPNPDK 183
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 197 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 370
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 474 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 388 ESTAPDRSYRSGEGKEQIPERHR 456
+STA D SY SG G E P HR
Sbjct: 483 DSTASDSSYDSGSGPELSPNEHR 505
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
Frame = +1
Query: 244 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 423
P+ R S S R R E RSR+ ++ ++S +P RS
Sbjct: 205 PSTDKRKSRSRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPR 264
Query: 424 EGKEQIPER-HRELRSH*AEAHGDVRKEPAPHK 519
K R HR+ RSH ++ +P K
Sbjct: 265 SSKRYRSSRSHRKHRSHSRSRSPRSKRSRSPRK 297
>SB_17850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKES 393
E E + E+PA+GQR+ R + + L R ++ + DS++ D+ + ES
Sbjct: 19 EEEEKDEEKEEKPATGQRK-RKTSTQKQALTRKKSKQSDSED-EDEKKSES 67
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 260 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 370
+T E++P +K A +LLDG+ +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
Score = 29.5 bits (63), Expect = 1.8
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 24/135 (17%)
Frame = +2
Query: 170 PSAEDV--ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAE 310
PS+E A T L DG+ FD ++ +H +T +++P +K A
Sbjct: 543 PSSEKSYQALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKTIKQDPSSEKSYQALR 602
Query: 311 KAHQNLLDGVEHFDKTQMKHT-----------TTEEKNPLXXXXXXXXXXXXNKFLNGIE 457
+LLDG+ F + + +H T E++P + L+G+
Sbjct: 603 DTTHDLLDGLRDFGQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYQALRDTTHDLLDGLR 662
Query: 458 NFDPTKLKHTETCEK 502
F+ K +H + K
Sbjct: 663 YFEQAKEEHAKLIPK 677
>SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69)
Length = 123
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 335 RPRGSGGLSPLRQRLCPEAGSSPESRCASAGSNQTSRYRR-IKTSGSSQWQRLQQT 171
RP GG E S S+CA + S SR RR + + QW R ++T
Sbjct: 66 RPTLDGGRRTSHTTSSSETISPSRSKCACSNSRSASRPRRHLDFTSQEQWTRKRRT 121
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = +1
Query: 274 EPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGR------KESTAPDRSYRSGEGKE 435
EP R+C SPP GRS+T+ + D R ++ ++PD S G +
Sbjct: 335 EPPQASRQC----SPPSRTGRSKTIHKRPRMTQPDSRNVSSTSRDKSSPDESSARGFTRP 390
Query: 436 Q--IPERHRELRSH*AEAH 486
+P R R +H ++ H
Sbjct: 391 DGYLPFRWRTRAAHPSQHH 409
>SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +1
Query: 244 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 423
P + HR S + +G+R G+ PE R ++ + E + T G
Sbjct: 75 PEKQHRGSVHKRGNGER----GQGSPEKQQRGSVHKRGNGEGKSSPENQHTGSIYKRGKG 130
Query: 424 EGKEQIPERHR 456
EGK +HR
Sbjct: 131 EGKSSPENQHR 141
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +2
Query: 140 DVDTNEKIVLPSAEDVATEK-----TQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVA 304
D+ ++VLP+ +DV K + GI + DSS + + + +PD ++
Sbjct: 341 DLAQQLQVVLPNVKDVTFTPFCWKFAYKFEYTGITESDSS-MSLARVRRTSSVPDSLQLS 399
Query: 305 AEKAHQNLLDGVEHFDKTQMKHTTTE 382
AE ++ V+H +K + TT +
Sbjct: 400 AELLSVGSVESVDHREKYPLNKTTAD 425
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Frame = +2
Query: 188 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 334
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 135 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 194
Query: 335 GVEHFDKTQMKHT-----------TTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLK 481
G+ +FD+ + +H E++P + L+G+ FD K +
Sbjct: 195 GLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEE 254
Query: 482 HTETCEK 502
H + K
Sbjct: 255 HAKLIPK 261
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +2
Query: 188 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 334
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 37 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 96
Query: 335 GVEHFDKTQMKH 370
G+ +FD+ + +H
Sbjct: 97 GLRYFDQAKEEH 108
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Frame = +2
Query: 188 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 334
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 282 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 341
Query: 335 GVEHFDKTQMKH 370
G+ +FD+ + +H
Sbjct: 342 GLRYFDQAKEEH 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Frame = +2
Query: 188 ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAEKAHQNLLD 334
A T L DG+ FD ++ +H + E++P +K A +L+D
Sbjct: 86 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLVD 145
Query: 335 GVEHFDKTQMKHT-----------TTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTKLK 481
G+ +F + + +H E++P + L+G+ FD K +
Sbjct: 146 GLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEE 205
Query: 482 HTETCEK 502
H + K
Sbjct: 206 HAKLIPK 212
>SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3)
Length = 334
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +1
Query: 268 GEEPASGQRR----CRSGESPPEPLGRSRT-LRQDSDEAHDDGRK---ESTAPDRSYRSG 423
GEEP+S S + P P+ + + +D D+ +G + ES A DRS+ SG
Sbjct: 181 GEEPSSRTETPDLYILSNDIPTSPVDEAPLPVDEDDDDEQVNGLRMLPESVALDRSHESG 240
Query: 424 EGKEQIP 444
G +P
Sbjct: 241 RGTPHLP 247
>SB_52335| Best HMM Match : FF (HMM E-Value=9.2)
Length = 236
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/91 (23%), Positives = 34/91 (37%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 420
E A D + Q + + E GR+R++ GR P + +
Sbjct: 128 EDAIIENDIAQSVQRYQLAVQEAKGETESCGRTRSVADAERSGDKHGRWAGVHPRVQHVT 187
Query: 421 GEGKEQIPERHRELRSH*AEAHGDVRKEPAP 513
G +++P R R S A+ H + PAP
Sbjct: 188 DPGIDRVPSRRRSKASAPAKVHAE-GGAPAP 217
>SB_24167| Best HMM Match : FF (HMM E-Value=9.2)
Length = 482
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/91 (23%), Positives = 34/91 (37%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 420
E A D + Q + + E GR+R++ GR P + +
Sbjct: 374 EDAIIENDIAQSVQRYQLAVQEAKGETESCGRTRSVADAERSGDKHGRWAGVHPRVQHVT 433
Query: 421 GEGKEQIPERHRELRSH*AEAHGDVRKEPAP 513
G +++P R R S A+ H + PAP
Sbjct: 434 DPGIDRVPSRRRSKASAPAKVHAE-GGAPAP 463
>SB_18429| Best HMM Match : FF (HMM E-Value=9.2)
Length = 456
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/91 (23%), Positives = 34/91 (37%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 420
E A D + Q + + E GR+R++ GR P + +
Sbjct: 348 EDAIIENDIAQSVQRYQLAVQEAKGETESCGRTRSVADAERSGDKHGRWAGVHPRVQHVT 407
Query: 421 GEGKEQIPERHRELRSH*AEAHGDVRKEPAP 513
G +++P R R S A+ H + PAP
Sbjct: 408 DPGIDRVPSRRRSKASAPAKVHAE-GGAPAP 437
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 206 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTE 382
KS+F + + + TET+E NP D AE+ ++ +G T+ K T E
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTNME 334
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 12 PHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 152
P + + E P P + L P T+ P+ V +ASTP S +P
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563
>SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 265 SGEEPASGQRRCRSGE---SPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 435
S + +S +RR R E PP + ++ DGR +S AP R+ +G KE
Sbjct: 8 SSKSSSSRRRRPREQEIFIGPPTGMTSDSSVASSRGRRDGDGRSKSKAPPRAPETGLPKE 67
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRT-LRQDSDEAHDDGR-------KEST 396
E ++RD + P S + R + + GRS+ LR D+ D GR K+
Sbjct: 90 ENRPSNRDKVDLPRSKRERTQDKSDGRDGRGRSKERLRDRRDDRSDKGRWSERRSSKDRE 149
Query: 397 APDRSYRSG------EGKEQIPERHRELRSH*AEAHGDVRKEPAP 513
+ R +RS + K + P R R R ++ G + P+P
Sbjct: 150 SRKREHRSRSKSRDKKPKPESPSRGRSSRRSRSQERGTSNRSPSP 194
>SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)
Length = 859
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 262 DSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAP-DRSYRSGEGKEQ 438
D+G +S R S ES E + + T +D D D R+ +++P D S R G+G +
Sbjct: 8 DNGVALSSMSSRQTSTESLEENIRKILTSCEDDDNEFLDRRRSTSSPEDVSNRKGKGSPK 67
Query: 439 IPERHRE 459
E ++
Sbjct: 68 EVENGKK 74
>SB_54391| Best HMM Match : MarR (HMM E-Value=0.95)
Length = 837
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 269 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 370
E++P +K A +LLDG+ +FD+ +H
Sbjct: 308 EQDPSSEKSYQALRDTTHDLLDGLRYFDQAWKEH 341
>SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18)
Length = 899
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 269 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 370
E++P +K A +LLDG+ +FD+ +H
Sbjct: 186 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEH 219
>SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 269 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 370
E++P +K A +LLDG+ +FD+ +H
Sbjct: 189 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEH 222
>SB_31270| Best HMM Match : rve (HMM E-Value=0.0043)
Length = 479
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 146 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 325
DT+E LP ED+ KT S F ++ + + N K +V ++ Q
Sbjct: 363 DTSEPADLPEPEDILNAKTMASETRRDPCFTTNTQEMAKKVFANFGLPKHIV-SDNGPQF 421
Query: 326 LLDGVEHF-DKTQMKHTTTEEKNP 394
+ + E+F K ++HTTT +P
Sbjct: 422 VSEESENFLQKNNIRHTTTPTGHP 445
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 259 RDSGEEPASGQRRCRSG-ESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 435
+DS E ++ R G E + + ++ ++ DE DD + D SG+GK+
Sbjct: 795 KDSSESEKGKAKKQRKGREKKGKEIKKNDDEEEERDEEEDDEEDDDEEDDSKKASGKGKK 854
>SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +1
Query: 268 GEEPASGQRRCRSGESPP--EPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQI 441
GEE + + GE+PP E + +++ E E D++ G G+E+
Sbjct: 12 GEEEKTEEAAPAEGEAPPAEEKPAEEESKPEENKEEEKKEESEKKEEDKTDGGGGGEEKK 71
Query: 442 PERHRELRSH*AEAHGDVRKE 504
E +E AE + E
Sbjct: 72 DEEKKEQEKKIAEKEAQKKVE 92
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +1
Query: 265 SGEEPASGQRRCRSGE---SPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGK 432
S + +S +RR R E PP + ++ DGR +S AP R+ G+ K
Sbjct: 1018 SSKSSSSRRRRPREQEIFIGPPTGMTSDSSVASSRGRRDGDGRSKSKAPPRAPGQGQAK 1076
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/115 (19%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Frame = +2
Query: 41 ACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKT------ 202
A + + P KD + T K Q + ++ E+ V P+ +++A ++
Sbjct: 1037 AATQMEEPESKDSTQEKTQEKDQSQQAPEQAQETQESQEESVKPTQQELAVQQATPLNQQ 1096
Query: 203 --QKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQ 361
Q+S +EK S + +TQ+K + + ++ ++L V+ ++Q
Sbjct: 1097 QIQESSTQVLEKQQSQEQPVKQTQQKTDVQQATLQEPQRQEESLTKQVQETQQSQ 1151
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 442 EFVLFLLRFDSFDRGQWILFFRRRVLHLSLVEVFYSVQEVL 320
+FVL++LRF +D I ++ + HL+LVE +Q+ L
Sbjct: 295 DFVLYMLRFSDYD----IYTGKKSIAHLTLVEFESWLQDEL 331
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 340 RTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH 471
RT SD + GR++S+ ++S K P H RSH
Sbjct: 181 RTSSYSSDSSPGSGREKSSHSRSVHKSHSSKHSHPSSHSTNRSH 224
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +1
Query: 334 RSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELR 465
R R + + D+ R R YR G + + PER R+ R
Sbjct: 238 RDREVERARDQKDVRARDRDPERSRDYRDGRPRNRSPERQRDQR 281
>SB_130| Best HMM Match : rve (HMM E-Value=0.0043)
Length = 297
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 146 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQN 325
DT+E LP ED+ KT S F ++ + + N K +V ++ Q
Sbjct: 181 DTSEPADLPEPEDILNAKTMASETRRDPCFTTNTQEMAKKVFANFGLPKHIV-SDNGPQF 239
Query: 326 LLDGVEHF-DKTQMKHTTTEEKNP 394
+ + E+F K ++HTTT +P
Sbjct: 240 VSEESENFLQKNNIRHTTTPTGHP 263
>SB_53645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 143 VDTNEKIVLPSAEDVATEKTQKSLFDGIEKF-DSSQLKHTET-QEKNP 280
VD +E +++ S+ D + EK S +EK+ S Q K T++ QEK P
Sbjct: 53 VDDHEVVIVVSSHDSSEEKRHLSTRYNLEKWPGSDQEKWTDSFQEKIP 100
>SB_36993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +1
Query: 250 EAHRDSGEEPA--SGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 423
EA RD +E S R + G R DEA DG E+T +
Sbjct: 73 EATRDGNDEATRDSHDEATRDSQDEAARDGHDEATRDSHDEATRDGHDEATRDSHDEATR 132
Query: 424 EGKEQ 438
+G ++
Sbjct: 133 DGNDE 137
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 334 RSRTLRQDSDEAHDD 378
RSRTL Q DEAHDD
Sbjct: 197 RSRTLLQVRDEAHDD 211
>SB_759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 9.4
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Frame = +2
Query: 71 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAED-VATEKTQKSLFDGIEKFDSSQ 247
K + V +S+ T CL + + ++++ AE V K S +E SS
Sbjct: 949 KQVGAVVLVTESKETSKQTRCLESL--HPRLLVDGAETKVNLIKCSSSSSSTLEP--SSA 1004
Query: 248 LKHTETQEKNPLPDKDVV---AAEKAHQNLLDGVEHFDKTQMKHTTTEEKNP 394
E E +P D+ A A Q+LLDGVE +Q+ ++E P
Sbjct: 1005 FLPREDSEIRCVPSSDIQDMRLAINASQDLLDGVERSSDSQLASVSSECNTP 1056
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 27.1 bits (57), Expect = 9.4
Identities = 27/93 (29%), Positives = 38/93 (40%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 420
E HR + E+ ASG R P G ++D+ A + K++ A S+
Sbjct: 342 ETVSLHRGALEK-ASGDMTERHAHRPT--YGARAFDKEDAMAARESYEKQARATYYSHAL 398
Query: 421 GEGKEQIPERHRELRSH*AEAHGDVRKEPAPHK 519
GE R E+ +AHG R PAP K
Sbjct: 399 GE-------RTSEMHPGYYQAHGHTRVPPAPEK 424
>SB_6454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 164 VLPSAEDVATEKTQKSLFDGIEKFDSSQ 247
++ A ++ATE+T K + G+E+ D Q
Sbjct: 35 IVAGAAEIATEQTNKIIDKGLERVDEQQ 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,957,222
Number of Sequences: 59808
Number of extensions: 336181
Number of successful extensions: 1589
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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