Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311H04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 79 1e-15
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 31 0.38
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 30 0.87
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 30 1.2
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 1.5
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 3.5
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 3.5
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 28 3.5
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 28 3.5
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 28 4.7
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 28 4.7
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical ... 27 6.2
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 6.2
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 6.2
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 6.2
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00040-2|AAA50667.4| 366|Caenorhabditis elegans Hypothetical pr... 27 8.1
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 27 8.1
AF040645-7|AAB94977.2| 304|Caenorhabditis elegans Hypothetical ... 27 8.1
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 79.4 bits (187), Expect = 1e-15
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +2
Query: 65 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 241
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 242 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 421
++L T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPT 115
Query: 422 XXXXNKFLNGIENFDPTKLKHTET 493
K L +FD + L H ET
Sbjct: 116 DVAREKTLQMAASFDKSALHHVET 139
Score = 68.1 bits (159), Expect = 4e-12
Identities = 37/91 (40%), Positives = 47/91 (51%)
Frame = +2
Query: 245 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 424
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK L
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 425 XXXNKFLNGIENFDPTKLKHTETCEKNPLPT 517
+ + I NF LK TET EKN LP+
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKNVLPS 113
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 31.5 bits (68), Expect = 0.38
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 450
+ P +RR + E + RSR R+ HD RK + + RS RS K ++
Sbjct: 7 KSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRS-RSRSPKRSRRDK 65
Query: 451 HRELRSH*AEAHGDVR--KEPAPHK 519
E + E G++R PAP K
Sbjct: 66 KEEKQEQ-EEEDGEIRDTTPPAPEK 89
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 30.3 bits (65), Expect = 0.87
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDS--DEAHDDGRKESTAPDRSYRSGEGK 432
+D + +R+ + S + GR RT ++ + D R +P+RS RS E +
Sbjct: 233 KDKNRKKEKTERKRKRSHSSSDRRGR-RTSKESRRRSRSRDTHRTRRRSPERSRRSTETR 291
Query: 433 EQIPERHRELRS 468
+ PER RS
Sbjct: 292 NERPERPSRWRS 303
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/94 (27%), Positives = 38/94 (40%)
Frame = +1
Query: 238 FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 417
+ P+ RDS + G RR RS + RSR +D D + D E +A R
Sbjct: 329 YVPSRKSRDSRDAGRRGSRRDRSRD-------RSRDRDRDRDRDNRDRYFEKSANSRREE 381
Query: 418 SGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHK 519
+EQ ER R + E + +E A +
Sbjct: 382 EQNRREQQRERERAEQERRREREKEREQEKAKER 415
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +1
Query: 244 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPD--RSYR 417
P + E PA RR R S + + T DS + DD S++ D S
Sbjct: 58 PRSSELPISESPAPRARRARKQRSKRKSVKPPNTSSDDSSDDSDDSSSSSSSDDSVSSKS 117
Query: 418 SGEGKEQIPERHRELRSH*AEAHG 489
S + P R R+ + + HG
Sbjct: 118 STNSSDSSPCRCRDGLAEWEQRHG 141
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 250 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKE 390
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 305 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 180
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -1
Query: 305 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 180
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 284 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 132
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 284 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 132
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 284 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 132
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 284 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 132
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 173 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD 352
S K + L +E S H + ++KN D ++ E Q L+G F+
Sbjct: 367 SCNSTIEHKEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFN 426
Query: 353 KTQMKH 370
+MK+
Sbjct: 427 SPEMKN 432
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 199 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 107
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 241 EPAEAH-RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSY- 414
+P E R E Q+R GE P + R + D+ D+ +E P R +
Sbjct: 141 DPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDE--EEEERPRRPHQ 198
Query: 415 RSGEGKEQIPERHRELRSH*AEAHGDVRKEPA 510
R G+ E E ++ R HG+ +EP+
Sbjct: 199 RRGDSYEDEEEDRKKYRPR----HGEEEEEPS 226
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/97 (23%), Positives = 37/97 (38%)
Frame = +1
Query: 217 RRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKEST 396
RR ++ + S + +S +R S S GR R+ D D GR++
Sbjct: 461 RRVQQQNASTPASDNSSSHDDSSERRHSTSDHSKENERGRKEDGREKDDFREDHGRED-- 518
Query: 397 APDRSYRSGEGKEQIPERHRELRSH*AEAHGDVRKEP 507
GK ++PE+ E H ++HG P
Sbjct: 519 ---------HGKSEVPEK-VEHEQHPPQSHGSPHPGP 545
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/80 (30%), Positives = 32/80 (40%)
Frame = +1
Query: 241 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 420
EP S EP G R CR + R R R+ S+E H + + A D Y+
Sbjct: 50 EPHITDIPSSSEPQEGSRECRLSKEAHRK--RLRRARETSEETH---TRLAKAAD--YKR 102
Query: 421 GEGKEQIPERHRELRSH*AE 480
E+ E +RE AE
Sbjct: 103 KRCSEETEEEYRERLKRQAE 122
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 27.9 bits (59), Expect = 4.7
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +1
Query: 259 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 438
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 439 IPERHRELRSH*AEAHGDVRKEPAP 513
P R RE S ++ +EPAP
Sbjct: 124 SPRRRRERSSERKQS-----EEPAP 143
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 27.9 bits (59), Expect = 4.7
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +1
Query: 259 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 438
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 439 IPERHRELRSH*AEAHGDVRKEPAP 513
P R RE S ++ +EPAP
Sbjct: 124 SPRRRRERSSERKQS-----EEPAP 143
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +1
Query: 271 EEPASGQRRCRSGE----SPPEPLGRSRTLRQD--SDEAHDDGRKESTA 399
EEP S S E +P P R + ++D D DDG KESTA
Sbjct: 6 EEPPSSSTSSESPEVVLKAPKAPTRRRKNSKKDRRQDMEVDDGEKESTA 54
>AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical
protein W02F12.3 protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 277 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTA 399
P++ + GE P EP R + +D D DD K ST+
Sbjct: 283 PSTAENNSDHGEGPSEPQNRPPSRPEDDD---DDSNKPSTS 320
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 277 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 456
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 13 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 68
Query: 457 ELRSH 471
RSH
Sbjct: 69 RDRSH 73
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 277 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 456
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 41 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 96
Query: 457 ELRSH 471
RSH
Sbjct: 97 RDRSH 101
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 277 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 456
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 99 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 154
Query: 457 ELRSH 471
RSH
Sbjct: 155 RDRSH 159
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 277 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 456
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 100 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 155
Query: 457 ELRSH 471
RSH
Sbjct: 156 RDRSH 160
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 277 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHD 375
P+S RR RS PP P G + + Q + D
Sbjct: 293 PSSPSRRSRSRSPPPYPPGHDKKMFQQKKKRQD 325
>U00040-2|AAA50667.4| 366|Caenorhabditis elegans Hypothetical
protein C18H2.2 protein.
Length = 366
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 152 NEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPD---KDVVAAEKA 316
NE L +++D ++ + FD SS K T+T+ +P PD K ++ +EK+
Sbjct: 214 NENSALVTSKDDELFESSMTSFDTSTHSRSSGRKRTQTRPYSPTPDSVSKPLIPSEKS 271
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Frame = +1
Query: 247 AEAHRDSGEEPASGQRRCRSGESPPEPLGRSRT----LRQDSD--EAHDDGRKESTAPDR 408
A + S PA G + P R R +R DSD E H K+S A D
Sbjct: 85 ASVSKASASTPARGAKAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE 144
Query: 409 SYRSGEGKEQIPERHRELR 465
+ +E +P++ +E++
Sbjct: 145 E-EVEDDEEPVPKKKKEVQ 162
>AF040645-7|AAB94977.2| 304|Caenorhabditis elegans Hypothetical
protein F52C6.11 protein.
Length = 304
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 53 SDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDV 187
S S K+ KVA K QLE SCL ++T E+I A D+
Sbjct: 243 SSEKSTKEKLKVAK--KYQLENLKASCLAKINTLEEIKAALAGDL 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,684,543
Number of Sequences: 27780
Number of extensions: 244273
Number of successful extensions: 1114
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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