Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311H03f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00003C0261 Cluster: PREDICTED: similar to coiled-coi...    55   1e-06
UniRef50_A1Z8D5 Cluster: CG18004-PA, isoform A; n=3; Drosophila ...    48   2e-04
UniRef50_Q4SNH2 Cluster: Chromosome 8 SCAF14543, whole genome sh...    39   0.080
UniRef50_UPI0000E48952 Cluster: PREDICTED: hypothetical protein;...    38   0.11 
UniRef50_Q8NBZ0 Cluster: Coiled-coil domain-containing protein 9...    38   0.18 
UniRef50_Q97L34 Cluster: Predicted membrane protein; n=1; Clostr...    35   0.98 
UniRef50_Q17I66 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q4Y058 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_Q4GYE3 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_UPI00015A6A91 Cluster: UPI00015A6A91 related cluster; n...    32   6.9  
UniRef50_Q1WEK4 Cluster: Putative uncharacterized protein merF-1...    32   6.9  
UniRef50_Q4XEE6 Cluster: Putative uncharacterized protein; n=2; ...    32   6.9  
UniRef50_A2EWW4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_UPI00003C0261 Cluster: PREDICTED: similar to coiled-coil
           domain containing 95; n=2; Endopterygota|Rep: PREDICTED:
           similar to coiled-coil domain containing 95 - Apis
           mellifera
          Length = 236

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +2

Query: 221 PEAE-PNYSAQXXXXXXXXXXXIYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDKP 397
           PE E PNY  Q           IYENECFQ+ALR++Q++LLKV            QY+K 
Sbjct: 25  PEEEVPNYKDQYRNLKRKLKFLIYENECFQEALRSTQRKLLKVNRDKSFLLDRLLQYEKV 84

Query: 398 XXXXXXXXXXXXXXXXXHIQMEISKRKKMEVG 493
                              +++ SKRKK+E+G
Sbjct: 85  DASFSESDETESSDEEV-TRLDTSKRKKIEIG 115


>UniRef50_A1Z8D5 Cluster: CG18004-PA, isoform A; n=3; Drosophila
           melanogaster|Rep: CG18004-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 297

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 34/114 (29%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
 Frame = +2

Query: 86  MLDGWYCRSMANMQXXXXXXXXXXXXXPT-----RTHDSQKGYXXXXXXEPEA-----EP 235
           MLDGWYCRS+AN +             P      R     +G          A     E 
Sbjct: 1   MLDGWYCRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSSVSAGLGAGET 60

Query: 236 NYSAQXXXXXXXXXXXIYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDKP 397
           ++  +           IYENE FQD L  +Q+RLLKV             Y+KP
Sbjct: 61  DFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKP 114


>UniRef50_Q4SNH2 Cluster: Chromosome 8 SCAF14543, whole genome
           shotgun sequence; n=3; Coelomata|Rep: Chromosome 8
           SCAF14543, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 82

 Score = 38.7 bits (86), Expect = 0.080
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +2

Query: 218 EPEAEPNYSAQXXXXXXXXXXXIYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDK 394
           + +AE +Y  +           +YE ECFQ+ LR +Q++LLK+            QY++
Sbjct: 4   QADAEIDYKRKYKNLKRKLKFLVYEQECFQEELRRAQRKLLKISRDKSFLLDRLLQYER 62


>UniRef50_UPI0000E48952 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 280

 Score = 38.3 bits (85), Expect = 0.11
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 218 EPEAEPNYSAQXXXXXXXXXXXIYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYDK 394
           +PE E N+  +           IYE ECFQ+ LR +Q++LLK+            QY++
Sbjct: 10  QPE-EVNFKEKYRSLKRKMRFLIYEQECFQEELRRAQRKLLKISRDKNFLLDRLLQYER 67


>UniRef50_Q8NBZ0 Cluster: Coiled-coil domain-containing protein 95;
           n=24; Euteleostomi|Rep: Coiled-coil domain-containing
           protein 95 - Homo sapiens (Human)
          Length = 244

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +2

Query: 224 EAEPNYSAQXXXXXXXXXXXIYENECFQDALRNSQKRLLKVXXXXXXXXXXXXQYD 391
           + E +Y  +           IYE+ECFQ+ LR +Q++LLKV            QY+
Sbjct: 6   DGEVDYKKKYRNLKRKLKFLIYEHECFQEELRKAQRKLLKVSRDKSFLLDRLLQYE 61


>UniRef50_Q97L34 Cluster: Predicted membrane protein; n=1;
           Clostridium acetobutylicum|Rep: Predicted membrane
           protein - Clostridium acetobutylicum
          Length = 301

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = -1

Query: 506 FVELHQLPFSFFYLFPFVCDQYHLKILYLHFLKL---CFLVCHIAVVY--PTKNYGPEKP 342
           F+ +H L    FY++  + +    ++LY   + L   CF + +  ++Y    KNY  +K 
Sbjct: 4   FLIIHLLICLIFYVYMHIKNTSKEELLYRLLVVLFIPCFGIVYFLIIYILDKKNYKSDKA 63

Query: 341 LITSSDYFLKHLENIH 294
           L    DY    LEN H
Sbjct: 64  LSDYEDYIKSTLENTH 79


>UniRef50_Q17I66 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 186

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 518 YSMHFVELHQLPFSFFYLFPFVCDQYHLKILYLHFLKLCFL 396
           Y   F+  + LPFS+F LFPF     HL I       +C L
Sbjct: 113 YLSAFLSFYLLPFSYFCLFPFCLSALHLLIFCFCLSAVCIL 153


>UniRef50_Q4Y058 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 87

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 521 NYSMHFVELH-QLPFSFFYLFPFVCDQYHLKILYLHFLKLCFL 396
           NY   ++ L  +L + FFY F F+C QY++ + Y   +K+CFL
Sbjct: 11  NYLKKYIILTLRLFYYFFYFFFFMCVQYYM-VKYKLIMKMCFL 52


>UniRef50_Q4GYE3 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 128

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -1

Query: 482 FSFFYLFPFVCDQYHLKILYLHFLKLCFLVCHIAVVYPTKN 360
           +SF + F FV   Y     +L F  LC L CHI  +Y  KN
Sbjct: 59  YSFNFNFNFVVRPYFHWFSFLFFSVLCALFCHIICIYFLKN 99


>UniRef50_UPI00015A6A91 Cluster: UPI00015A6A91 related cluster; n=1;
           Danio rerio|Rep: UPI00015A6A91 UniRef100 entry - Danio
           rerio
          Length = 384

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 521 NYSMHFVELHQLPFSFFYLFP-FVCDQYHLKILYLHFLKLCFL 396
           ++ +H   LH + F+F YL   F+C+  H    Y  F+ +C L
Sbjct: 247 SFYLHLFTLHIIIFAFIYLMHNFICNCLHYASFYSLFICICLL 289


>UniRef50_Q1WEK4 Cluster: Putative uncharacterized protein merF-1;
           n=1; Streptomyces sp. NRRL 30748|Rep: Putative
           uncharacterized protein merF-1 - Streptomyces sp. NRRL
           30748
          Length = 218

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -1

Query: 200 SIPSASRV-FLSVLRHYCYHWPLRLPACSPLNGS 102
           ++P+A+R+ +   LRH    W  RLP C PL  S
Sbjct: 21  AVPAAARLGWFGRLRHRMSRWAARLPVCRPLGSS 54


>UniRef50_Q4XEE6 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 129

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 443 YHLKILYLHFLKLCFLVCHIAVVYPTKNYGPEKPLITSSDYFL 315
           +H   LYL+ +  C L  H+   YP KNY  E  ++     +L
Sbjct: 48  FHFSFLYLYNILRCTLTQHVFESYPDKNYEKEIHIVKEQLLYL 90


>UniRef50_A2EWW4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1102

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = -1

Query: 479 SFFYLFPFVCDQYHLKILYLHFLKLCFLVCHIAVVYPTKNY 357
           SFF  FPF  + +++ ++Y+  +   FLV   + ++P+++Y
Sbjct: 186 SFFEFFPFPRNLFYILLVYISLIIQLFLVAKESHLFPSRDY 226


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,287,675
Number of Sequences: 1657284
Number of extensions: 8032111
Number of successful extensions: 18343
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18322
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)