Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311G10f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 48 6e-06
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 46 2e-05
05_01_0103 + 686770-687017,687120-687270 45 3e-05
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 44 7e-05
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 44 7e-05
03_06_0479 + 34217170-34217172,34217337-34217786 40 0.001
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 40 0.001
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 36 0.020
03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421 35 0.046
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 31 0.74
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 31 0.74
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.3
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 30 1.3
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 2.3
01_01_0646 + 4904790-4904996,4905437-4905483,4905623-4905662,490... 29 3.0
08_02_0955 + 22994266-22995630 28 4.0
02_04_0537 - 23734010-23734715,23735326-23735333 28 4.0
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 5.2
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 6.9
01_06_1522 - 37962431-37963060,37963216-37963542 27 6.9
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 9.1
03_02_0647 + 10154668-10156041 27 9.1
02_01_0695 - 5202091-5202498,5204103-5204588 27 9.1
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
+SW PDT++V+ KMLY+SS D K+ L G+Q +QA P
Sbjct: 107 ISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDP 145
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3
Query: 513 SWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
SW PDTA+ + KMLY+SS D ++ L G+Q IQA P
Sbjct: 95 SWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDP 132
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
++W PDT++V+ KM+Y+SS D K+ L G+Q +QA P
Sbjct: 81 IAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDP 119
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 424
+SW PDT+KV+ KMLY+SS D K+ L G+Q
Sbjct: 352 ISWSPDTSKVRSKMLYASSKDRFKRELDGIQ 382
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -3
Query: 510 WCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQA 409
W PD AKV+ KMLY+SS + KK L G+Q +QA
Sbjct: 109 WSPDNAKVRSKMLYASSNERFKKELNGIQLEVQA 142
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
+SW P A V+ KM+Y+SS + KK L GVQ +QA P
Sbjct: 99 VSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDP 137
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
++W P T++++ KMLYS+S D +K+ L G IQA P
Sbjct: 94 IAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDP 132
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
++W P ++++ KMLY++S + ++ L GV IQA P
Sbjct: 94 VAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDP 132
>03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421
Length = 927
Score = 34.7 bits (76), Expect = 0.046
Identities = 23/102 (22%), Positives = 48/102 (47%)
Frame = -2
Query: 517 DVVVPGHRQGQEEDVVL*LVRRSEKVPCRSSEVHPSGPTSREASQEAVEEKLRATDRQ*T 338
D VVP H + E+ L E+ P +H + PT++EAS+ EE+ A+ R
Sbjct: 443 DHVVPFHESAEFEEPTDPLAYPDEQ-PLPLESLHETDPTAQEASETEQEEEATASQRLDQ 501
Query: 337 AFTHELATKPNPLSDTPALTTRGHDTTSRLVLLQRKTNSINM 212
+ + + +TP + + + +L ++++ S+++
Sbjct: 502 PPNEQNEVEDDKAPETPTYSVATQISDKKFLLERKRSLSLSL 543
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQADRP 400
+SW P ++++ K +Y+ S + + L GV IQA P
Sbjct: 100 ISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDP 138
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 432 GVQKYIQADRPLGKRLRRPSKRSSAPP 352
G +K A P G+R+ RP KR++APP
Sbjct: 614 GSKKGAAASTPPGRRIGRPPKRAAAPP 640
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 98 AAPPFKPKRITASRQK*AGGGGTYP 172
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 446 KSPLSEFRSTSKRTDLSGSVSGGRRREAPRHRSPINSIYTRA 321
+SP RS S+ S S GRR +PR RSP Y+R+
Sbjct: 122 RSPRYRGRSRSRSPRYRRSPSYGRRSYSPRDRSPKRRSYSRS 163
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 138 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 37
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>01_01_0646 +
4904790-4904996,4905437-4905483,4905623-4905662,
4905770-4905970,4906260-4906472,4906561-4906629,
4906711-4906840,4906934-4906974,4907063-4907287,
4907575-4907745,4908713-4908778
Length = 469
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = -2
Query: 430 SSEVHPSGPTSREASQEAVEEKLRATDR--------Q*TAFTHELATKPNPLSDTPA 284
S + P+ P++ A++ A+++KL D T + EL T PNPL D PA
Sbjct: 24 SRKAAPAAPSTSMAAKWAMKKKLVGGDAGYVLEDVPHLTDYLPELPTYPNPLQDNPA 80
>08_02_0955 + 22994266-22995630
Length = 454
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 446 KSPLSEFRSTSKRTDLSGSVSGGRRREAPRHRSPINSIY-TRARDETEP 303
K P + S S+ +D GRRR R RSP S +R+R +T P
Sbjct: 4 KRPAAASGSASEASDCEAG-GAGRRRSPSRSRSPSRSASPSRSRSKTPP 51
>02_04_0537 - 23734010-23734715,23735326-23735333
Length = 237
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 467 LARSTL*KSPLSEFRSTSKRTDLSGSVSGGRRREAPRHRSPINSIYTRARDETEP 303
+ARS+ SP R++ R+ +G+ GG RR R+ + +RAR P
Sbjct: 93 MARSSAAISPSPPRRASPARSPTAGAAGGGGRRSPASPRTASSPRSSRARAHPAP 147
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 443 SPLSEFRSTSKRTDLSGSVSGGRRREAPRHRSPIN-SIYTRARDETEPALRHSCPDDTRP 267
+P SE + S R G G R+ RS + S R RD+ + RH D R
Sbjct: 25 APRSEEKERSSRRRSGGGGGGDEERDDGERRSKRSRSEENRDRDKDKDRDRHRDRDKDRD 84
Query: 266 RH 261
RH
Sbjct: 85 RH 86
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 303 GFGFVASSCVNAVYWRSVARSFSS 374
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
>01_06_1522 - 37962431-37963060,37963216-37963542
Length = 318
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 3 MVGRAHSPPGVKWLLEAID 59
+VG+ H PPG +WL E +D
Sbjct: 44 LVGQLHLPPGGRWLDEYMD 62
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 377 RRREAPRHRSPINSIYTRARDETEPALRHSCPDD 276
R R A R RSP +R + P+ RH C D
Sbjct: 358 RHRRAMRSRSPSKRRRHGSRGRSPPSSRHGCAKD 391
>03_02_0647 + 10154668-10156041
Length = 457
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 341 LLAIGGAELLFDGLLRRFPRGRSAWM 418
L G A L+ D + R PRG AWM
Sbjct: 146 LADFGAARLVSDAAVSRGPRGTPAWM 171
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 107 PFKPKRITASRQK*AGGGGTYP 172
PF P + A++ K AGGGG P
Sbjct: 203 PFYPTKANAAQSKAAGGGGCRP 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,003,710
Number of Sequences: 37544
Number of extensions: 360556
Number of successful extensions: 1189
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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