Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18963-2|AAC14458.1|  165|Caenorhabditis elegans unc-60 protein.       37   0.008
L18963-1|AAC14457.1|  152|Caenorhabditis elegans unc-60 protein.       37   0.008
AF024494-3|AAL02461.1|  165|Caenorhabditis elegans Uncoordinated...    37   0.008
AF024494-2|AAL02463.1|  152|Caenorhabditis elegans Uncoordinated...    37   0.008
AF024494-1|AAL02462.2|  212|Caenorhabditis elegans Uncoordinated...    37   0.008
AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical ...    29   2.0  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.       27   6.2  
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n...    27   6.2  
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated...    27   6.2  
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated...    27   6.2  
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    27   6.2  

>L18963-2|AAC14458.1|  165|Caenorhabditis elegans unc-60 protein.
          Length = 165

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 507 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQ 412
           CPD A +KKKM+Y+SS  A+K SL G  K +Q
Sbjct: 110 CPDGASIKKKMVYASSAAAIKTSL-GTGKILQ 140


>L18963-1|AAC14457.1|  152|Caenorhabditis elegans unc-60 protein.
          Length = 152

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = -3

Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQ 412
           + +CPD A V+++MLY+SS  ALK SL G++   Q
Sbjct: 95  VQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQ 128


>AF024494-3|AAL02461.1|  165|Caenorhabditis elegans Uncoordinated
           protein 60, isoform a protein.
          Length = 165

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 507 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQ 412
           CPD A +KKKM+Y+SS  A+K SL G  K +Q
Sbjct: 110 CPDGASIKKKMVYASSAAAIKTSL-GTGKILQ 140


>AF024494-2|AAL02463.1|  152|Caenorhabditis elegans Uncoordinated
           protein 60, isoform c protein.
          Length = 152

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = -3

Query: 516 MSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQ 412
           + +CPD A V+++MLY+SS  ALK SL G++   Q
Sbjct: 95  VQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQ 128


>AF024494-1|AAL02462.2|  212|Caenorhabditis elegans Uncoordinated
           protein 60, isoform b protein.
          Length = 212

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 507 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQ 412
           CPD A +KKKM+Y+SS  A+K SL G  K +Q
Sbjct: 110 CPDGASIKKKMVYASSAAAIKTSL-GTGKILQ 140



 Score = 37.1 bits (82), Expect = 0.008
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = -3

Query: 519 LMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQ 412
           L++ CPD A V+++MLY+SS  ALK SL G++   Q
Sbjct: 154 LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQ 188


>AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.6 protein.
          Length = 254

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 278 RQGRSVGERVRFRRELVCKCC 340
           R+GR  G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
           protein Y40C5A.3 protein.
          Length = 2344

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = -2

Query: 502 GHRQGQEEDVV-L*LVRRSEKVPCRSSEVHPSGPTSREASQEAVEEKLRATDRQ*TAFTH 326
           GH  G       + LV  +E++   +SE   S  T+ E + E    +   T+   T  T 
Sbjct: 170 GHSDGDSTSTAEIVLVTTTEEITTTTSETTTSATTTEETTTEPSTTEPSTTEEFTTEETT 229

Query: 325 ELATKPNPLSDTPALTTRGHDTT 257
            ++T P    +     T G+D T
Sbjct: 230 TVSTNPPTTPELSDDPTDGNDAT 252


>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
           protein C01C7.1 protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 416 SKRTDLSGSVSGGRRREAPRHRSPINSIYTRARDETEPA 300
           S+ T L+ ++S  R+   P  R P+ ++Y R +D   PA
Sbjct: 683 SQSTTLT-ALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720


>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
          Length = 6632

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 454  RSEKVPCRSSEVHPSGPTSREASQEAVEEK 365
            + EK P +S+      PT +E S E VEEK
Sbjct: 1636 KKEKSPEKSATEDVKSPTKKEKSPEKVEEK 1665


>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
           non-receptor tyrosinekinase protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 416 SKRTDLSGSVSGGRRREAPRHRSPINSIYTRARDETEPA 300
           S+ T L+ ++S  R+   P  R P+ ++Y R +D   PA
Sbjct: 683 SQSTTLT-ALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720


>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
            protein 89, isoform a protein.
          Length = 6632

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 454  RSEKVPCRSSEVHPSGPTSREASQEAVEEK 365
            + EK P +S+      PT +E S E VEEK
Sbjct: 1636 KKEKSPEKSATEDVKSPTKKEKSPEKVEEK 1665


>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
            protein 89, isoform g protein.
          Length = 7122

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 454  RSEKVPCRSSEVHPSGPTSREASQEAVEEK 365
            + EK P +S+      PT +E S E VEEK
Sbjct: 1636 KKEKSPEKSATEDVKSPTKKEKSPEKVEEK 1665


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 454  RSEKVPCRSSEVHPSGPTSREASQEAVEEK 365
            + EK P +S+      PT +E S E VEEK
Sbjct: 1636 KKEKSPEKSATEDVKSPTKKEKSPEKVEEK 1665


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,838
Number of Sequences: 27780
Number of extensions: 258101
Number of successful extensions: 760
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)