Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy...    29   2.9  
AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p pro...    29   2.9  
AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD...    29   2.9  
AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC...    29   2.9  
AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB...    29   2.9  
AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA...    29   2.9  
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    28   8.8  
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    28   8.8  
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    28   8.8  

>Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy
           chain protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 MAQVLPIRFQEHLQVS 158
           M Q LPIRFQEHLQ++
Sbjct: 1   MTQPLPIRFQEHLQLT 16


>AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p
           protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 MAQVLPIRFQEHLQVS 158
           M Q LPIRFQEHLQ++
Sbjct: 1   MTQPLPIRFQEHLQLT 16


>AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD,
           isoform D protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 MAQVLPIRFQEHLQVS 158
           M Q LPIRFQEHLQ++
Sbjct: 1   MTQPLPIRFQEHLQLT 16


>AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC,
           isoform C protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 MAQVLPIRFQEHLQVS 158
           M Q LPIRFQEHLQ++
Sbjct: 1   MTQPLPIRFQEHLQLT 16


>AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB,
           isoform B protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 MAQVLPIRFQEHLQVS 158
           M Q LPIRFQEHLQ++
Sbjct: 1   MTQPLPIRFQEHLQLT 16


>AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA,
           isoform A protein.
          Length = 1678

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 MAQVLPIRFQEHLQVS 158
           M Q LPIRFQEHLQ++
Sbjct: 1   MTQPLPIRFQEHLQLT 16


>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
            protein.
          Length = 2146

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 184  GKCNKLMGVLTCKCS*NRIGNTCAMFIDHSVLHKP 80
            G CN  +G  TC+C     G  C + ID    + P
Sbjct: 915  GNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNP 949


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
            isoform A protein.
          Length = 2146

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 184  GKCNKLMGVLTCKCS*NRIGNTCAMFIDHSVLHKP 80
            G CN  +G  TC+C     G  C + ID    + P
Sbjct: 915  GNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNP 949


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
            isoform B protein.
          Length = 2189

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 184  GKCNKLMGVLTCKCS*NRIGNTCAMFIDHSVLHKP 80
            G CN  +G  TC+C     G  C + ID    + P
Sbjct: 958  GNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNP 992


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,805,817
Number of Sequences: 53049
Number of extensions: 460905
Number of successful extensions: 905
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)