Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54327-13|CAE48494.1|  619|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z54307-9|CAE48498.1|  619|Caenorhabditis elegans Hypothetical pr...    29   2.7  
L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.        28   3.5  
AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock pr...    28   3.5  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z81581-7|CAB04659.1|  269|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81122-5|CAB03357.1|  579|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z54327-13|CAE48494.1|  619|Caenorhabditis elegans Hypothetical
           protein F14F11.1h protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -2

Query: 190 MIGKCNKLMGVLTCKCS*NRIGNTCAMFIDHSVLHKPKTKKRATLLKSRTLK 35
           ++G    LMGVLT       I +  AMF  H+       KKR  +L+   +K
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYSHAQARSKLPKKRRRVLQPHEIK 540


>Z54307-9|CAE48498.1|  619|Caenorhabditis elegans Hypothetical
           protein F14F11.1h protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -2

Query: 190 MIGKCNKLMGVLTCKCS*NRIGNTCAMFIDHSVLHKPKTKKRATLLKSRTLK 35
           ++G    LMGVLT       I +  AMF  H+       KKR  +L+   +K
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYSHAQARSKLPKKRRRVLQPHEIK 540


>L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 361 PNSICDHMIGG*NARWGYFLLNAKF 435
           P+SI D + G  N  +GY  LN KF
Sbjct: 478 PSSIIDEVTGNSNTSYGYDALNGKF 502


>AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock
           protein protein 60 protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 361 PNSICDHMIGG*NARWGYFLLNAKF 435
           P+SI D + G  N  +GY  LN KF
Sbjct: 478 PSSIIDEVTGNSNTSYGYDALNGKF 502


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 184  GKCNKLMGVLTCKCS*NRIGNTCAMFID 101
            GKC  + G  +C CS    GN C   ID
Sbjct: 1000 GKCIPINGSYSCMCSPGFTGNNCETNID 1027


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 184  GKCNKLMGVLTCKCS*NRIGNTCAMFID 101
            GKC  + G  +C CS    GN C   ID
Sbjct: 1000 GKCIPINGSYSCMCSPGFTGNNCETNID 1027


>Z81581-7|CAB04659.1|  269|Caenorhabditis elegans Hypothetical
           protein T02E1.7 protein.
          Length = 269

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 378 SYDWGLKR*MGLFFTKRQVLNIIF 449
           SY+WGL     LF T   ++N++F
Sbjct: 56  SYNWGLNYHFSLFLTIVMIINLLF 79


>Z81122-5|CAB03357.1|  579|Caenorhabditis elegans Hypothetical
           protein T13F2.6 protein.
          Length = 579

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 487 LYTLTITRFEIKKKIIFKTWRLVKNNPI 404
           LY + + RF   +  +F  WRL + NPI
Sbjct: 392 LYEIKVVRFH--RSNVFAKWRLARKNPI 417


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,122,885
Number of Sequences: 27780
Number of extensions: 251609
Number of successful extensions: 517
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)