Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311G07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113497-1|AAM29502.1|  440|Drosophila melanogaster RE54265p pro...    30   1.7  
AE014296-1255|AAF50564.3|  440|Drosophila melanogaster CG8563-PA...    30   1.7  
BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p pro...    28   6.7  
AY094956-1|AAM11309.1|  897|Drosophila melanogaster SD01232p pro...    28   6.7  
AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB...    28   6.7  
AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA...    28   6.7  

>AY113497-1|AAM29502.1|  440|Drosophila melanogaster RE54265p
           protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = -1

Query: 389 LSGLACQFP-LCRV--LGRSVAETLRAK*SASLPTRLNLVSPRQITVFVPIACSVAETLR 219
           +SGLA ++P  CR   LGRS      A  S SL +R   V PR++  ++  A    E + 
Sbjct: 156 MSGLAARYPQFCRYESLGRSNEGRHIAALSISLNSR---VRPRRVA-YIQAATHGREWIT 211

Query: 218 T*-----GSQMLTYLRDFLLVLEDKYTFLLP 141
           T        ++L+ LR F  VL+D   FL+P
Sbjct: 212 TQTVLYLAYELLSNLRAFTRVLQDVEIFLVP 242


>AE014296-1255|AAF50564.3|  440|Drosophila melanogaster CG8563-PA
           protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = -1

Query: 389 LSGLACQFP-LCRV--LGRSVAETLRAK*SASLPTRLNLVSPRQITVFVPIACSVAETLR 219
           +SGLA ++P  CR   LGRS      A  S SL +R   V PR++  ++  A    E + 
Sbjct: 156 MSGLAARYPQFCRYESLGRSNEGRHIAALSISLNSR---VRPRRVA-YIQAATHGREWIT 211

Query: 218 T*-----GSQMLTYLRDFLLVLEDKYTFLLP 141
           T        ++L+ LR F  VL+D   FL+P
Sbjct: 212 TQTVLYLAYELLSNLRAFTRVLQDVEIFLVP 242


>BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p
           protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 376 HVNFHYVGCSVARSRRHC-VQSRVLAYLHDLI 284
           H+  H+ G  VAR+  HC V S  LA  +DLI
Sbjct: 692 HIRSHHSGLDVARNTYHCTVCSEDLASSNDLI 723


>AY094956-1|AAM11309.1|  897|Drosophila melanogaster SD01232p
           protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 376 HVNFHYVGCSVARSRRHC-VQSRVLAYLHDLI 284
           H+  H+ G  VAR+  HC V S  LA  +DLI
Sbjct: 386 HIRSHHSGLDVARNTYHCTVCSEDLASSNDLI 417


>AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB,
           isoform B protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 376 HVNFHYVGCSVARSRRHC-VQSRVLAYLHDLI 284
           H+  H+ G  VAR+  HC V S  LA  +DLI
Sbjct: 692 HIRSHHSGLDVARNTYHCTVCSEDLASSNDLI 723


>AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA,
           isoform A protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 376 HVNFHYVGCSVARSRRHC-VQSRVLAYLHDLI 284
           H+  H+ G  VAR+  HC V S  LA  +DLI
Sbjct: 692 HIRSHHSGLDVARNTYHCTVCSEDLASSNDLI 723


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,028,618
Number of Sequences: 53049
Number of extensions: 508524
Number of successful extensions: 1123
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)